Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1153 ATGAAGGAGTACTCTGTAAGTGTGACCTCAAATACTCTTGTGATCACCTTTACCCCTTCCAATAATTCTATTGTTTTCGCGAATGCCATAGAAGTTTTTTCAGCCCTTGATGGACTCATTCACGATGATTCTTCTGATTCAACGTCAAAGAAGAAATTTGGCATGGTGGTTGGTGTGAGCCTTGGGACATTTAGTGCAGTGGTCTTCATGGGAGTTTTCTTTGTACTATGCAGAAAAAGAAGGCTGGCACGACGAGGCCATTCAAAGACATGGATTCCCCTATCCATTAATGTTGGAACTTCCATCACCATGGGAAGTAAGTGGATTCAAACTTTGGGTATCGCATCTCTCGGTCTAGCAGATCAGTTCCAAACTGAAATTGAAATGTTGTCTCAGCTTCGCCATTGCCATCTGGTGTCACTGATTGGCTATTGTGATGACATGAATGAAATGATCTTGATATATGAATATATGGAGATGCAACGATTAACAGAAAAGTCAGATGTCAATTCATTTGGGGTTGTTCTGTGTGAGATTCTATGTGCAAGACCTGTTATGGATCCATCACTTCCCAGGGAACAAAAATGCTTGGCTGACTTCGGTGTTGATAAGCCTTCAATGGGAGATGTTTTGTGTGATTATGAGTGTGCTCTGCAACTTCAGGAGGCAGTTGTCCAAGGCGATCTTGGAGAAAATGGTATCAATACCAATATGATTGGTCTCTCTCCAAATGTCAATCATTTTAACCACGATCCAAGTGTTTCTTGGTAG 771 0.415 MKEYSVSVTSNTLVITFTPSNNSIVFANAIEVFSALDGLIHDDSSDSTSKKKFGMVVGVSLGTFSAVVFMGVFFVLCRKRRLARRGHSKTWIPLSINVGTSITMGSKWIQTLGIASLGLADQFQTEIEMLSQLRHCHLVSLIGYCDDMNEMILIYEYMEMQRLTEKSDVNSFGVVLCEILCARPVMDPSLPREQKCLADFGVDKPSMGDVLCDYECALQLQEAVVQGDLGENGINTNMIGLSPNVNHFNHDPSVSW 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1153 256 Gene3D Phosphorylase Kinase; domain 1 108 159 - -
Dere08g1153 256 PANTHER OS07G0166700 PROTEIN 120 162 IPR045272 GO:0004714|GO:0006468
Dere08g1153 256 SUPERFAMILY Protein kinase-like (PK-like) 116 212 IPR011009 -
Dere08g1153 256 Pfam Protein tyrosine and serine/threonine kinase 121 164 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1153 Dere-ChrDere08 15529522 15530833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1153 1 95 Receptor kinase-like Gene Family AT3G46290 40.000 9.82e-08 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere08g1153 PK_Tyr_Ser-Thr 1.3e-05 CL0016