Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1142 ATGGAAAATTCTGAACCCCTCGACGTCAAATCCGTGGGGATTCCGATCCACGGTAGCAAATACGTGAGGTTCAACATTCTGGGCAATCCTTTCGAGGTATATGCCAAGTACGCGCCTCCCATAAAGCCCGTCGGACGCGGTGCTTACGGCATCGTTTGCTGTGCGACGAACTCTGAGACCCAAGAAGAGGTTGCGATCAAGAAGATCGGGAATGCCTTCGACAACAGGATTGATGCCAAGAGGACTTTTCGAGAAATCAAGCTTCTTTGTCATATGGATCATGATAATATTATTAAAATTAAGGACATAATACGGCCACCAGAGAGGCAAAAATTTAATGATGTTTACATTGTGTATGAATTGATGGATACTGACCTTCATCAGATCATACGTTCTACCCAGGATCTCACAGATGAGCATTGTCAATATTTCCTATATCAGCTCTTGAGAGGGTTGAAGTACATACACTCTGCAAATGTTTTGCACCGAGATCTAAAACCAAGCAACCTACTTCTCAATGCAAACTGTGACCTCAAGATCTGCGACTTTGGGCTAGCCAGAACTACCTCTGAGACAGACTTTATGACGGAATATGTTGTGACTCGTTGGTACAGGGCCCCTGAATTGCTATTGAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCCGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAGCCTCTATTTCCTGGTAAAGATTATGTTCAGCAACTGACGCTTATAACTGAGTTACTAGGTTCCCCGGATGATTCAGATCTTGGATTCCTGCGAAGTGATAATGCAAAGAAATATGTTAAACAGCTCCCGCATGTGGAAAAGCAACCCTTTGCATGCAGGTTTCCTGATGTATCGCCATTGGCAATTGATCTTGCCGAGAAAATGTTGGTTTTCGATCCGTCCAAGCGCATAACCGTGGAAGAAGCATTGAATCACCCATATTTGTCAAGTCTGCATGAGATCAACGAGGAGCCCATTTGCCCAACTCCTTTTGTCTTTGACTTCGAACAGACTACTCTAAACGAAGAAGATATAAAGGAGCTCATATGGAGTGAGTCTCTGAACTTCCACCCAGATGAGATGGTGGAATAG 1119 0.4352 MENSEPLDVKSVGIPIHGSKYVRFNILGNPFEVYAKYAPPIKPVGRGAYGIVCCATNSETQEEVAIKKIGNAFDNRIDAKRTFREIKLLCHMDHDNIIKIKDIIRPPERQKFNDVYIVYELMDTDLHQIIRSTQDLTDEHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLTLITELLGSPDDSDLGFLRSDNAKKYVKQLPHVEKQPFACRFPDVSPLAIDLAEKMLVFDPSKRITVEEALNHPYLSSLHEINEEPICPTPFVFDFEQTTLNEEDIKELIWSESLNFHPDEMVE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1142 372 ProSitePatterns MAP kinase signature. 73 176 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dere08g1142 372 FunFam Mitogen-activated protein kinase 122 351 - -
Dere08g1142 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Dere08g1142 372 SUPERFAMILY Protein kinase-like (PK-like) 41 330 IPR011009 -
Dere08g1142 372 ProSitePatterns Protein kinases ATP-binding region signature. 44 68 IPR017441 GO:0005524
Dere08g1142 372 CDD STKc_TEY_MAPK 31 367 - -
Dere08g1142 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 37 325 - -
Dere08g1142 372 SMART serkin_6 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1142 372 Gene3D Phosphorylase Kinase; domain 1 21 361 - -
Dere08g1142 372 FunFam Mitogen-activated protein kinase 23 132 - -
Dere08g1142 372 ProSiteProfiles Protein kinase domain profile. 38 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1142 372 Pfam Protein kinase domain 42 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1142 372 Gene3D Transferase(Phosphotransferase) domain 1 122 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1142 Dere-ChrDere08 15426640 15428482 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1142 13 365 MAP Kinase Gene Family AT1G07880 81.020 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dere08g1142 Pkinase 1e-71 CL0016