Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1135 ATGGGTAATCTTAGTTTTGCCCAAAAAGGGAATCTTTCCCTAGCAGATCGTGTTCACACTGTGGATGTGAAAGATATTTTTTTGGATCCTCGGAACATTTTCACCCCGTTTATATGAACTTTCCTAGCCTCGCAACCCCTATATTTCCACTCACAATTTCTCAATCTCGGCTTGTGTTCTGCTCGTGTCATCCTCGTGCTAGGGTTGTGCGCTCCATTTTCTGGTCTCAGCTCCACTCTCAGTTTCCAAGCCATGGGAAAGTCATACCCGACCGTTAGTCCCGATTACCTCAAGGGCGTGGAGAAGGCCAAGAAGAAGCTCAGGGGTTTGATCGCCGAGAAGAACTGTGCTCCGATCATGCTCCGTTTAGCGTGGCACTCGGCTGGGACCTATGACGTGAAGACGAAGACCGGTGGTCCCTTCGGAACCATGAAGCACCCAGCTGAACTTGCCCACGGGGCTAACAATGGGCTTGATATTGCTGTTAGGCTGTTGGAGCCCATCAAGGAGCAGTTCCCAATCTTGACTTACGCTGATTTCTACCAGTTGGCTGGGGTAGTTGCTGTTGAGGTCACCGGTGGGCCTGAAATTCCTTTCCACCCTGGAAGAGAGGACAAGCCTGAGCCACCTCCGGAGGGCCGCTTGCCCGATGCAACAAAAGGTTCTGACCATTTGAGGGATGTGTTTGGCACTATGGGGCTTAGCGATCAAGATATTGTTGCTCTCTCTGGAGGTCACACCCTTGGAAGGTGCCACAAGGAGCGTTCTGGATTTGAGGGTGCCTGGACTTACAACCCTCTGATTTTTGACAACTCATACTTCAAGGAACTCTTGAGTGGAGAGAAAGAAGGCCTCCTGCAGCTGCCGTCTGACAAGGCACTCCTGAGTGACCCAGTATTCCGCCCTCTTGTTGAGAAATATGCAGTGGATGAAGATGCTTTCTTCGCTGATTATGCCGAGGCACATCTAAAACTCTCTGAACTTGGGTTTGCCGAGGCCTAA 1002 0.508 MGNLSFAQKGNLSLADRVHTVDVKDIFLDPRNIFTPFIXTFLASQPLYFHSQFLNLGLCSARVILVLGLCAPFSGLSSTLSFQAMGKSYPTVSPDYLKGVEKAKKKLRGLIAEKNCAPIMLRLAWHSAGTYDVKTKTGGPFGTMKHPAELAHGANNGLDIAVRLLEPIKEQFPILTYADFYQLAGVVAVEVTGGPEIPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGTMGLSDQDIVALSGGHTLGRCHKERSGFEGAWTYNPLIFDNSYFKELLSGEKEGLLQLPSDKALLSDPVFRPLVEKYAVDEDAFFADYAEAHLKLSELGFAEA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1135 333 ProSitePatterns Peroxidases active site signature. 117 128 IPR019794 GO:0004601
Dere08g1135 333 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Haem peroxidase superfamily signature 117 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 MobiDBLite consensus disorder prediction 195 222 - -
Dere08g1135 333 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 88 329 IPR044831 GO:0004601|GO:0034599
Dere08g1135 333 Gene3D Peroxidase, domain 2 216 322 - -
Dere08g1135 333 Gene3D - 103 329 - -
Dere08g1135 333 ProSiteProfiles Plant heme peroxidase family profile. 158 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 FunFam L-ascorbate peroxidase, cytosolic 216 322 - -
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 96 116 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 117 132 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 174 192 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 254 278 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 280 305 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 135 145 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 232 253 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 149 173 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 214 231 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 PRINTS Plant ascorbate peroxidase signature 193 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 SUPERFAMILY Heme-dependent peroxidases 83 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 CDD ascorbate_peroxidase 89 333 - -
Dere08g1135 333 Pfam Peroxidase 106 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere08g1135 333 FunFam Cytosolic ascorbate peroxidase 103 222 - -
Dere08g1135 333 MobiDBLite consensus disorder prediction 199 222 - -
Dere08g1135 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 238 248 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1135 Dere-ChrDere08 15270991 15274954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1135 157 325 Peroxidase AT4G16270 31.429 8.21e-18 81.3