Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1128 ATGGTTACCGCGAAAATGGAACAGTTCTTAGACAACTTGACGCCAATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTTCAACTCATCATCCCCGTCGAGTCTGCTCACCGGGCCGTCTCTTATTTGGGCGAACTCGGTCTCCTCCAATTCCGAGATTTAAATGACAATAAAAGTCCTTTCCAGAGAACATTTGTTAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTACGGTTCTTTAAAGAACAAATCAGTAAAGCTGGTCTTATGTCTTCTTCTCTTCCTGTCTTGCAACCAGATATCGAGTTGGAAGAACTAGAGTATCAACTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGCGAGAAACTTCGGCAATCATATAACGAGCTCTTGGAGTTTAAGATTGTTTTGCAAAAGGCAGGCAGTTTTCTTGTGTCGAATCATAATCATGCATTCTCAGAGGAGATGGAGCTGGAGGAGAATGTATACTCGAATGATGGCTATGTTGAGACAGCATCTTTGCTTGAGCAGGAAATGAGGCCTGGACCATCAAATCAATCTGGTTTAAGATTTATCAGTGGACTAATTTGTAAATCGAAGGTTCTTAGATTTGAAAGGATGTTGTTTCGTGCAACAAGAGGCAATATGCTTTTCAATCAGGCAACAGCTGATGAGCTAATTGTGGATCCTGTTTCAAATGAGATGATGGAGAAAACAGTGTTTGTTGTGTTTTTCTCCGGGGGGCAGGCAAGAACAAAGATTCTTAAGATCTGTGAAGCATTTGGTGCAAATTGTTACCCTGTCCCTGAAGATATTAGTAAACAGAGGCAAATAACTAGGGAGGTTTCATCACGCCTTTCTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAATAAGGCCCTTGCTTCTGTTGGGGGTCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTGTATTTGCAAAAACACAGATTCAGGAGGCACTGCAGCGTGCAACTTTTGATAGCAATTCTCAAGTGGGTATAATCTTCCATCCAATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACCATTTTACCAGTGCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCGAATCCTGCAGTTTACACAGTTATTACATTTCCATTCCTTTTTGCTGTGATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGAGCATTGGTTCTTATAGCACGTGAAAGCAGGCTCAGTAAGCAGAGACTTGGAAGCTTTACGGAGATGTTATTTGGTGGGCGCTATGTGCTTCTTTTGATGTCGCTGTTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGTGGGTCTGCTTACAAATGCCGAGATACTTCGTGCAGGGATGCACACACGGCTGGCTTAGTCAAGTACCGAGATCCATACCCATTTGGTGTGGACCCCAGCTGGCGTGGAAGTCGATCAGAATTGGCTTTTCTTAACTCTCTGAAGATGAAGATGTCCATTCTTTTGGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGTTACTTCAATGCACGTTACTTTGGCAACTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTGAACAGTCTGTTTGGGTATCTTTCTCTTCTCATTGTTGTTAAGTGGTGTACTGGTTCTCAGGTAGACCTCTATCATGTAATGATTTACATGTTTCTTAGCCCCACTGATAATCTTGGTGAGAACCAGTTGTTCTGGGGCCAAAGGCCACTTCAAATTGTGTTATTGCTTTTGGCTTTAATTGCAGTTCCATGGATGCTTTTTCCAAAACCTTTTATACTAAAGAAGCTTCACTTGGAGAGATTCCAAGGACGCACTTATGGTATGCTTACTACCTCTGAGATAGATCTTGAGGTGGAACTTGATTCTGCTAGGCAACATCACGAGGAATTCAATTTCAGTGAGATCTTTGTTCACCAAATGATCCACTCGATTGAATTTGTTCTTGGTGCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCTACTGTTTTTTATGAGAAAGTACTGCTTCTAGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGGCTAGCCGTTTTTGCCTTTGCAACTGCCTTTATACTTCTCATGATGGAGACCCTTAGTGCTTTTCTTCATGCCCTACGTCTTCACTGGGTAGAATTTCAAAACAAATTCTACCATGGCGATGGCTACAAGTTCAGTCCTTTTTCCTTTGCTTCCTTAACAGAGGATGATGATTGA 2475 0.4206 MVTAKMEQFLDNLTPMDLMRSEKMTFVQLIIPVESAHRAVSYLGELGLLQFRDLNDNKSPFQRTFVNQVKRCAEMSRKLRFFKEQISKAGLMSSSLPVLQPDIELEELEYQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKAGSFLVSNHNHAFSEEMELEENVYSNDGYVETASLLEQEMRPGPSNQSGLRFISGLICKSKVLRFERMLFRATRGNMLFNQATADELIVDPVSNEMMEKTVFVVFFSGGQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLSDLEATLDAGIRHRNKALASVGGHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSNSQVGIIFHPMDAVESPPTYFRTNHFTSAYQEIVDAYGVARYQEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESRLSKQRLGSFTEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGGSAYKCRDTSCRDAHTAGLVKYRDPYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNARYFGNSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCTGSQVDLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAVPWMLFPKPFILKKLHLERFQGRTYGMLTTSEIDLEVELDSARQHHEEFNFSEIFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFSPFSFASLTEDDD 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1128 824 PIRSF ATP6V0A1 14 824 IPR026028 GO:0000220|GO:0046961
Dere08g1128 824 Coils Coil 105 132 - -
Dere08g1128 824 PANTHER VACUOLAR PROTON ATPASES 18 823 IPR002490 GO:0033179|GO:0046961|GO:1902600
Dere08g1128 824 Pfam V-type ATPase 116kDa subunit family 42 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1128 Dere-ChrDere08 15173248 15188524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1128 6 817 Primary Pumps ATPases(2) AT2G28520 81.595 0.0 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1128 08 15173248 15188524 Dere07g0882 07 12334126 12343513 CCT
Dere08g1128 08 15173248 15188524 Dere08g1128 08 15173248 15188524 ECH