Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1104 ATGTGCATAATATCCTGTCATCCAAAACTTCTCTTCAGCCGTTATTCTGTTTTCTTTCAAACACAGTTTTTTGCAAAGGAGCACTGTAATACGGTTGGGAAAGTGACACTTACTTGACTGAGAGAGTATTCTTCAATGGAGGGAGAATATCAACTGGGGTCTAAGTTTCCACCTGGTTTCAGGTTCCATCCATCTGATGAGGAACTCATAGTTCATTACCTACAGAATAAAATCACCTCACGTCCACTTCCAGCGCTGATTATTGCTGAAATTGATCTATTAGTTGACATAACCACCAATCCCTCCAGGCTTAAAGGCTCCATGCGATTGGATGACTGGGTGCTGTGTCGGGTTCGACACAAGGGCTACACATCGAAGAATGTTTGTGAGAACCAGAATCAAGAGAACCATTGTGGATCAAATTTCCAGGCAAATCTACCAAGGTATGAGAAATACCCAACAAACACAAACCTAGAGGCTAACATGGTCACAGATTATCAGTACAAAGACTATCGAATCATAGCCTCTATTCTTGTTGGCGAACCTGTACTTCCCATTGAGAACATGCCAAGTACTGTGAGCTTTATAGGCAGCAAAGGCGACAGCCTCAATCCGGTGTACGAAGAAGGTTCCAACAAAGTGAATTCTCACACGGCAATTCCCTCATTTGGCACCTACTTCGACATGCTGAATAGAAAATCTACTGAGGATAATCAATGCGAGAATCTCATTTCTTTTGACAGGAAGCTAAACATTGAGAACAAAATAGATGATTTTACCAGCAAGGCGCTGATGAATACTGACATGAACTGCTATAATCAAAATCAGTCTCAAGATGGCATCCTCAATGGGAGCCCACCAGATCCTACCATCAATTTTGAAGAACTAAACAAATTGGCCTTCGCAGGAAGACTTTTAAAATGA 924 0.4167 MCIISCHPKLLFSRYSVFFQTQFFAKEHCNTVGKVTLTXLREYSSMEGEYQLGSKFPPGFRFHPSDEELIVHYLQNKITSRPLPALIIAEIDLLVDITTNPSRLKGSMRLDDWVLCRVRHKGYTSKNVCENQNQENHCGSNFQANLPRYEKYPTNTNLEANMVTDYQYKDYRIIASILVGEPVLPIENMPSTVSFIGSKGDSLNPVYEEGSNKVNSHTAIPSFGTYFDMLNRKSTEDNQCENLISFDRKLNIENKIDDFTSKALMNTDMNCYNQNQSQDGILNGSPPDPTINFEELNKLAFAGRLLK 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1104 307 PANTHER NAC TRANSCRIPTION FACTOR 56 56 94 - -
Dere08g1104 307 SUPERFAMILY NAC domain 48 114 IPR036093 GO:0003677|GO:0006355
Dere08g1104 307 Pfam No apical meristem (NAM) protein 57 126 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1104 Dere-ChrDere08 14943125 14945339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1104 56 123 NAC Transcription Factor Family AT1G61110 52.174 6.47e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere08g1104 NAM 1.3e-09 No_clan