Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1075 ATGGCGATGGCTGTGGCTCAACACAGAGAAAACAGCAGTGGGAGCATTGACAAGCACCTTGATTCCGGAAAATATGTACGATACACGGCTGAGCAGGTTGAAGCGCTTGAACGGGTTTATGCTGAGTGCCCCAAGCCTAGCTCCTTGCGAAGGCAGCAGTTGGTCCGTGAGTGTCCCATTCTTGCTAACATCGAGCCGAAGCAAATCAAAGTTTGGTTCCAGAATCGCAGGTGTAGAGAGAAGCAGAGAAAAGAGTCTTCCCGGCTTCAGACTGTTAACCGGAAACTTACAGCAATGAACAAGTTGTTGATGGAGGAAAATGATCGATTGCAGAAGCAGGTGTCACAACTAGTATGCGAGAATGGATTTATGCGTCAGCAATTGCACACTCCGTCAGCAGCAGCTACTGATGCAAGTTGTGATTCTGTTGTTACTACTCCTCAGCCGTCTCTGAGAGATGTTAACAATCCTGCTGGACTCCTGTCAATTGCAGAGGAGACCTTGACAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGAATCTTTGCCATTTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCCTGTGGTCTTGTTAGCTTAGAACCAACAAAGATTGTAGAGATCCTAAAAGATCGTCCATCATGGTATCGGGATTGCCGTAGCCTAGAAGTTTTCACAATGTTCCCTGCTGGGAATGGAGGAACTATTGAACTTGTTTACACACAGACATATGCTCCAACAACTCTGGCTCTTGCCCAGGATTTCTGGTCTCTGAGATACACTACAACTATGGACAATGGCAGTCTCCTGGTTTGTGAAAGGTCATTGTCTGGTTCTGGCGCTGGCCCTAATGCAGCTGCTGCCTCTCAATTTGTAAGAGCTGAAATGCTCCCTAGTGGCTACTTAATTCGACCATGTGAAGGTGGTGGATCTATCATCCACATTGTAGACCATTTAAATCTTGAGGCTTGGAGTGTTCCGGAGGTGCTGCGACCACTTTATCAATCATCAAAAGTTGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTACATCAGGCAAATAGCTCAGGAAACTAGCGGTGAGGTGGTATATGGTTTGGGTAGGCAACCTGCTGTTCTGCGAACATTCAGCCAAAGGTTGAGCAGAGGCTTCAATGATGCTGTCAATGGATTCAATGATGATGGGTGGTCAGTACTGAACTGTGATGGTACTGAGGATGTAATTATTGCGGTAAATTCTACTAAGAATTTGAGTGGTACCACTAATCCAGCGAGTTCCCTGACATTCCTTGGGGGAATTCTTTGTGCAAAGGCTTCCATGTTGCTCCAAAATGTCCCTCCTGCAGTTTTGGTTCGCTTTCTGAGGGAGCACCGCTCAGAGTGGGCTGATTTCAATGTTGATGCCTATTCTGCTGCATCACTGAAAGCTGGCTCCTATGCCTATCCTGGAATGAGGCCTACAAGGTTCACTGGCAGTCAAATCATCATGCCTCTCGGCCATACAATTGAACAGGAAGAGATGCTCGAGGTTATTCGTCTTGAAGGCCACTCTATTGCTCAAGAGGATGCCTTTGCTTCTAGGGACATTCATCTCCTACAGATATGTAGTGGAATTGATGAGAATGCTGTGGGAGCTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCGGATGATGCACCATTGGTGCCTTCTGGTTTCCGTATAATCCCATTGGAGTCAAAACCAGGTGATAAAAAGGATGCATTGACTACAAATCGGACTCTGGATTTGACATCTGGTCTTGAAGTGGGCCCAGTAACGAATCATGCTGGAGCTGATGAATCATCATGTCATAACAGTCGATCAGTGTTGACAATTGCCTTCCAATTTCCTTTTGACAGCAATTTACAGGACAATGTTGCAGTTATGGCACGTCAATATGTTCGTAGTGTGATATCCTCAGTTCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAAATCCAACCGTTGGGCCAAAGCTTTCCCCTGGCTCTCCTGAGGCTCTTACATTAGCTCACTGGATCTGCCAGAGTTATAGTTACTATTTGGGGACGGAATTACTGAGACCTGATTCACATGTTGGTGACACAGTACTGAAACATTTATGGCATCATCCGGATGCTATCTTGTGCTGTTCGTTAAAGTCGTTGCCAGTGTTCATCTTTGCTAACCAGGCAGGGCTTGACATGCTGGAAACAACTCTAGTGGCTTTACAAGACATCACATTGGATAAGATCTTTGATGAGTCTGGACGCAAGGCATTGTGTGCAGACTTTCCCAAGTTGATGCAGCAGGGGTTTGCATATCTACCAGCTGGGATCTGCATGTCCACGATGGGGCGGCACGTTTCATTTGACCAAGCCATCGCTTGGAAAGTACTTGCTGCAGATAATAACACTGTTCATTGTTTGGCTTTCTCTTTCGTAAATTGGTCCTTTGTATGA 2529 0.4634 MAMAVAQHRENSSGSIDKHLDSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLVRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSAAATDASCDSVVTTPQPSLRDVNNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIVEILKDRPSWYRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLALAQDFWSLRYTTTMDNGSLLVCERSLSGSGAGPNAAAASQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYQSSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGTEDVIIAVNSTKNLSGTTNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEQEEMLEVIRLEGHSIAQEDAFASRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLESKPGDKKDALTTNRTLDLTSGLEVGPVTNHAGADESSCHNSRSVLTIAFQFPFDSNLQDNVAVMARQYVRSVISSVQRVAMAISPSGINPTVGPKLSPGSPEALTLAHWICQSYSYYLGTELLRPDSHVGDTVLKHLWHHPDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFPKLMQQGFAYLPAGICMSTMGRHVSFDQAIAWKVLAADNNTVHCLAFSFVNWSFV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1075 842 SUPERFAMILY Bet v1-like 162 374 - -
Dere08g1075 842 CDD bZIP 76 115 - -
Dere08g1075 842 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Dere08g1075 842 SMART START_1 162 372 IPR002913 GO:0008289
Dere08g1075 842 SMART HOX_1 21 87 IPR001356 GO:0003677
Dere08g1075 842 Gene3D - 197 379 IPR023393 -
Dere08g1075 842 Pfam Homeodomain 24 82 IPR001356 GO:0003677
Dere08g1075 842 FunFam Homeobox-leucine zipper protein REVOLUTA 24 79 - -
Dere08g1075 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 20 842 IPR044830 GO:0003700
Dere08g1075 842 Pfam START domain 163 370 IPR002913 GO:0008289
Dere08g1075 842 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Dere08g1075 842 SUPERFAMILY Homeodomain-like 23 85 IPR009057 -
Dere08g1075 842 Coils Coil 93 120 - -
Dere08g1075 842 CDD homeodomain 24 84 IPR001356 GO:0003677
Dere08g1075 842 Gene3D - 17 90 - -
Dere08g1075 842 Pfam MEKHLA domain 698 841 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1075 Dere-ChrDere08 14747033 14753199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1075 1 842 Homeobox Transcription Factor Family AT5G60690 82.429 0.0 1451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere08g1075 START 1.4e-45 CL0209