Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1053 ATGTGTAGGACCAAACTGGCCATTAACGCCGCCAGTCCTAGCTCACGCCCTCAAACCTCACGTTCTCAGTCTGAATCCACTCCTCATCAAATTCCAAGGCCAACGACATCCTCCACCTCCACCGCCACCACCACCTCTTCTGTCTTCCAACCCTCAGCTCCATACTCCGCCTCCTTAGGTTATAGGCTCACCTCCGATACCTCCATTTCAAGCCCAACCTCCTTTGCCACTCTTCGAGATGCCCTACCAGAAAATCCCCACATCTACGATTTCTCTGAAATTCACTCTGCTACTAATAATTTCCTTGCCAACCGCTACTCCTCCTCTTCCATTCCCTCTTGGCGCTGTACACTTCGTGGCCGGGATGTTGTCGTCTTTCAGCGCAAATTCCGACGCCAAATCGAGACGACCCAGCTCAGACAACGGCTCTCCTTTGTTGGCCGCAGCCACCATGTTAGCATTGTCAAGCTTCTCGGTGCTTCAATCTCCGGTCACTACATCTACCTCGTGTACGACTTTGTGAATGGAGCCAACCTCTCTGTCTGTTTGAGAAACACAAACAACCCCGACTTCACGGTTTTATCCAGCTGGATATCGAGGATGCAGGTTGCAACGGATATCGCTCACGGGCTCGATTATATTCATAACAGAACAGGCTTAAACCTGAGGTTAACGCATAATCACATCAATAGCAGTAATATTATCGTCACAGAACCTTTCTTCAACGCCAAGATTTGTCACTTCGGCACCGCCCAGCTGTGCGGTGAAATCGACGAAGAACAAGAAATCGCCGAGCAATCGTCCTTTTCCCCGTCGCCTGTGAGATCAAAAGAATTGAAAACATCGGGAAGCTCACGTGTTAAAATCGAGGGTTTGAGAGGATACATGTCGCCGGAATTTCAATCCACCGGCGTGGCGACCCAGAAGTCCGACGTGTATGCTTTCGGGGTGGTGCTGCTGGAACTGTTATCAGGAGAGGAGCCACTGAAATATAGGGTCGATAAAAGAACAAGCAATTTCATGAGAACCTCGGTGATCGAGACGGCGAGGGCTGTCGTCGAAGGCGGTTGTGAAGAAGGTGGGCTGAGGAAGTGGTTGGATCGGAGGCTGAAGGACTCGTTCCCGATTGAGGTTGCAGAGAAGGCGACACGTGTAGCATTAAAGTGCGTCCACGTGGATCCAGAAAAGAGGCCGGATATGAGCCGGGTCGCTGTAAAGATTTCGGAGCTGTATTTGCATTCGAAGATTTGGTCTGACAATATCAAGATGCCTTCTGCGATTTCAGTTTCATTGGCACCTCGATGA 1305 0.5034 MCRTKLAINAASPSSRPQTSRSQSESTPHQIPRPTTSSTSTATTTSSVFQPSAPYSASLGYRLTSDTSISSPTSFATLRDALPENPHIYDFSEIHSATNNFLANRYSSSSIPSWRCTLRGRDVVVFQRKFRRQIETTQLRQRLSFVGRSHHVSIVKLLGASISGHYIYLVYDFVNGANLSVCLRNTNNPDFTVLSSWISRMQVATDIAHGLDYIHNRTGLNLRLTHNHINSSNIIVTEPFFNAKICHFGTAQLCGEIDEEQEIAEQSSFSPSPVRSKELKTSGSSRVKIEGLRGYMSPEFQSTGVATQKSDVYAFGVVLLELLSGEEPLKYRVDKRTSNFMRTSVIETARAVVEGGCEEGGLRKWLDRRLKDSFPIEVAEKATRVALKCVHVDPEKRPDMSRVAVKISELYLHSKIWSDNIKMPSAISVSLAPR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1053 434 Gene3D Phosphorylase Kinase; domain 1 67 173 - -
Dere08g1053 434 MobiDBLite consensus disorder prediction 8 48 - -
Dere08g1053 434 SUPERFAMILY Protein kinase-like (PK-like) 116 411 IPR011009 -
Dere08g1053 434 ProSiteProfiles Protein kinase domain profile. 91 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1053 434 MobiDBLite consensus disorder prediction 1 48 - -
Dere08g1053 434 PANTHER OS09G0572100 PROTEIN 1 434 - -
Dere08g1053 434 Pfam Protein kinase domain 132 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g1053 434 Gene3D Transferase(Phosphotransferase) domain 1 176 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1053 Dere-ChrDere08 14478882 14480186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1053 84 417 Receptor kinase-like Gene Family AT1G51940 31.378 4.45e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere08g1053 Pkinase 4.4e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1053 08 14478882 14480186 Dere08g1053 08 14478882 14480186 ECH