Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1049 ATGAGTGAGACACCTCATGATAAAGCCATTCAAACCAGAGTACCTGTAGGTTGCAGAGGCAGCAACAAGAAGGATCGCCACTCTAAGGTGGATGGGCGAGACCGTCGTGTTCGTTTGCCGGCGGTGTGCGCTGCTCGCGTCTTCCAACTCACACGTGAGCTGGGAAAAAAGAATCACGGAGAGACCATTGAGTGGCTCTTGCGCCAGGCGGAGCCGTCGATTATCGCCGCCACAGGCGGTGGCGTCTCGTCATCCAAAACAAGCTTGGCTTCATCGGACTCGGTTGCTGCTGAACCACCCTGCGAGGACAAAGCTGTTTGGGGACGTACAGGTGTCGCGGAGGGTGATGCTTCAAAAGGTGAACAGCAAGCTTTGCCTTCACTGGAGTTTGATTTTTTGACAGGCTTAGACATGGAGTTTTATGGTAATGAGACTGCAATGCTCCATTAA 450 0.5289 MSETPHDKAIQTRVPVGCRGSNKKDRHSKVDGRDRRVRLPAVCAARVFQLTRELGKKNHGETIEWLLRQAEPSIIAATGGGVSSSKTSLASSDSVAAEPPCEDKAVWGRTGVAEGDASKGEQQALPSLEFDFLTGLDMEFYGNETAMLH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1049 149 MobiDBLite consensus disorder prediction 78 102 - -
Dere08g1049 149 MobiDBLite consensus disorder prediction 19 33 - -
Dere08g1049 149 ProSiteProfiles TCP domain profile. 23 77 IPR017887 -
Dere08g1049 149 MobiDBLite consensus disorder prediction 1 33 - -
Dere08g1049 149 Pfam TCP family transcription factor 22 98 IPR017887 -
Dere08g1049 149 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 99 IPR005333 GO:0003700
Dere08g1049 149 MobiDBLite consensus disorder prediction 78 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1049 Dere-ChrDere08 14457109 14457558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1049 24 91 TCP Transcription Factor Family AT5G23280 75.000 1.32e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere08g1049 TCP 2.7e-28 No_clan