Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1041 ATGGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACAGGTAGAGAACAAACCATGGTAGCCTCTGTGGCTTCCCCAATGGTCCCTTCTGACCACACTGCCAAATTCGCTCTTCCTGTTGATTCTGAACACAAAGCTAAAGTCTTTAAACTCTTCTCCTTTGCCAATCCCCACATGAGAACTTTCCACCTATCCTGGATTTCCTTCTTCACTTGCTTTGTCTCAACCTTCGCAGCTGCTCCTTTGGTTCCCATAATCCGTGACAACCTTAACCTCACCAAATCCGACATTGGGAATGCAGGGGTTGCCTCTGTGTCTGGCAGCATCTTCTCTAGGCTTGTGATGGGTGCAGTTTGTGACCTCTTAGGCCCACGTTATGGCTGTGCCTTCCTCATTATGCTTTCGGCACCGACTGTCTTCTGCATGTCGTTTGTAAACGATGCTGCTGGTTACACAGTGATACGGTTCATGATTGGGTTTTCATTGGCCACTTTCGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATTGTAGGGCTTGCGAACGGGACGGCAGCTGGGTGGGGTAACATGGGAGGTGGGGCCACTCAGCTTATAATGCCATTGGTGTATGAAATAATCAAAAGAGCAGGTGCTACACCCTTTCTCGCCTGGAGAATTGCCTTCTTCGTCCCAGGTTGGATGCATATCATCATGGGAGTCCTCGTCTTGACGCTCGGCCAAGACTTGCCTGATGGTAACCTTGGTGCCTTGCAGAAGAAGGGTGATGTCGCTAAAGACAAGTTCACCAAGGTGCTGTGGTATGCAATAACAAATTACAGGACATGGATTTTTGCTCTGCTATACGGCTACTCTATGGGAGTAGAATTAACCACTGATAATGTCATTGCTGAGTATTTCTATGATAGGTTTGATCTGAAGCTGCACACTGCTGGAATCATTGCTGCTTCATTCGGAATGGCTAACTTCATTGCTCGACCCTTCGGCGGATATACATCTGATCTGGCTGCTCGCTTGTTTGGGATGAGAGGAAGGCTTTGGACCCTCTGGATTCTTCAAACCTTAGGAGGTGCTTTCTGCATATGGCTTGGGCGTGCCAATTCTCTTCCTGTTGCTGTCTTAGCCATGATTCTGTTCTCTGTCGGAGCTCAAGCAGCTTGTGGTGCAACTTTTGGCATCATCCCCTTCATCTCAAGGCGTTCTCTTGGCATCATATCGGGACTAACCGGTGCGGGTGGCAACTTCGGGTCGGGCCTGACCCAGTTGATCTTCTTCTCAACCTCAAGATACTCCACTTCTACGGGTCTGTCCTTGATGGGGCTTATGATTGTGTGTTGCACTCTTCCCGTGACTCTCGTACACTTCCCACAGTGGGGTGGCATGTTCTTTCCACCTTCTAAAGACGTTAACAAATCTACGGAAGAGTACTATTACGCATCTGAATGGAACGAAGAGGAGAGGGAGAAGGGTTTGCACCAGCAGAGTCTCAAGTTTGCAGAGAACAGCCGCTCTGAGAGAGGCAAGCGTGTTGGTTCTGCTCCTACACCACCAAATACAACTCCCACCCATAACGTTTAG 1593 0.4871 MEIEGFPGSSMHGVTGREQTMVASVASPMVPSDHTAKFALPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVNDAAGYTVIRFMIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYEIIKRAGATPFLAWRIAFFVPGWMHIIMGVLVLTLGQDLPDGNLGALQKKGDVAKDKFTKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFDLKLHTAGIIAASFGMANFIARPFGGYTSDLAARLFGMRGRLWTLWILQTLGGAFCIWLGRANSLPVAVLAMILFSVGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSRYSTSTGLSLMGLMIVCCTLPVTLVHFPQWGGMFFPPSKDVNKSTEEYYYASEWNEEEREKGLHQQSLKFAENSRSERGKRVGSAPTPPNTTPTHNV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1041 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 3 514 IPR044772 GO:0015112
Dere08g1041 530 Gene3D MFS general substrate transporter like domains 56 252 IPR036259 -
Dere08g1041 530 CDD MFS_NRT2_like 64 457 IPR044772 GO:0015112
Dere08g1041 530 Pfam Major Facilitator Superfamily 68 424 IPR011701 GO:0022857|GO:0055085
Dere08g1041 530 FunFam Nitrate transporter 2.1 264 465 - -
Dere08g1041 530 Gene3D MFS general substrate transporter like domains 263 464 IPR036259 -
Dere08g1041 530 MobiDBLite consensus disorder prediction 490 512 - -
Dere08g1041 530 SUPERFAMILY MFS general substrate transporter 57 458 IPR036259 -
Dere08g1041 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 63 457 IPR020846 GO:0022857
Dere08g1041 530 MobiDBLite consensus disorder prediction 490 530 - -
Dere08g1041 530 FunFam High affinity nitrate transporter 56 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1041 Dere-ChrDere08 14350215 14352274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1041 5 528 Inorganic Solute Cotransporters AT5G60770 80.344 0.0 886