Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1039 ATGTGTATGGTTTTGAGCGATTCTAAGGGTAAGAAACAAAGGATACAATTTGCATTGCTCTTGCGGATGACGCATTGTCTGGATGTCAAGTATGGAAAATGTATGCACATTTTGCCCATTGAAGGTGTTACTGGCAATCTGTTTAATGCCTGCTTGAAACGTGGGAAAGGAAATCTGTTTCTGGTTCATGAAGGGATGAGGAGTGTAGAGTTCAAGGTCATTGAAATTAATTTGGGGGAATATTGTGTGGTTACTTCAAACACTGAAATTTTCTGTGAGGGGGAGCCCATAAAAAGGGAGGATGAGGATACGTTAGATGAAGTTGGGTATGGTGACGTGGGTGGTGTTGATTTAGAGAGAATTGCAAAAGATACTCATGGTTATATTGGTGCTAACCTGGTAGCCCTTTGCACTAAAGCTGCATTGCAATGCATTAGAGAGAATATGGATGTCATAAACTTGGAAGATAAAACCATTGATGTTGAAGTTGTTAAGGTGCCTAATGTTAGTTGGGATAACATTGGTGGCCTTGAGAAAATCAAGCACTGTTCAATATCCTGTGGAGCACTTAGAATTTTGGCATTTGCTCAAACCTTACATCAATCCCGAGGGTTTGGAAGTGAATTTAGGTTTTCAAAGATTAAGAATAAAGTTGCTAGATCTAATGTTATAACAACTTCTACTGATGGGAATGATGATGATGATGATTTGCATAGTTAG 720 0.3889 MCMVLSDSKGKKQRIQFALLLRMTHCLDVKYGKCMHILPIEGVTGNLFNACLKRGKGNLFLVHEGMRSVEFKVIEINLGEYCVVTSNTEIFCEGEPIKREDEDTLDEVGYGDVGGVDLERIAKDTHGYIGANLVALCTKAALQCIRENMDVINLEDKTIDVEVVKVPNVSWDNIGGLEKIKHCSISCGALRILAFAQTLHQSRGFGSEFRFSKIKNKVARSNVITTSTDGNDDDDDLHS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1039 239 Gene3D - 29 113 - -
Dere08g1039 239 FunFam Cell division control 48 29 112 - -
Dere08g1039 239 Pfam AAA+ lid domain 116 156 IPR041569 -
Dere08g1039 239 SUPERFAMILY Cdc48 domain 2-like 28 107 IPR029067 -
Dere08g1039 239 Gene3D - 114 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1039 Dere-ChrDere08 14329455 14333816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1039 94 150 Calmodulin-binding Proteins AT3G56690 35.000 9.84e-06 44.3