Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1034 ATGGCTATACTCAGAAGCAGCAGCAGTAAAGGGAAAGGTGGGATTGTGAAGCTGAAGATTGTGGTTAAGAAGCTCCAAAAGAAGCTGTTACTGGGTATGAAATCAAGTGCATATCGGGATGAATATGAAGAAGAAGAAGGTAGTGAGTCGAGCTGTGTACCAGAAGATGTGAAAGAAGGACATTTTGCAGTGATTGCTGAGGATGGGGAGGAGCCAAAGAGATTTGTGGTGCCATTAAGCTGTTTAACGCACCCATCTTTCTTGAGGCTGTTGGAGGAAGCAGCCGAAGAGTACGGGTTCGATCACGAAGGTGCACTGACCATTCCTTGCCCGCCTACGGAGCTTGAGAGGATATTGGAGGGAAACTCTGAAAGTGATGCTGTTAGCTGGAAATCACGTAAACCCATGGTCCGAACCTACTGA 423 0.4704 MAILRSSSSKGKGGIVKLKIVVKKLQKKLLLGMKSSAYRDEYEEEEGSESSCVPEDVKEGHFAVIAEDGEEPKRFVVPLSCLTHPSFLRLLEEAAEEYGFDHEGALTIPCPPTELERILEGNSESDAVSWKSRKPMVRTY 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1034 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 118 IPR003676 GO:0009733
Dere08g1034 140 Pfam Auxin responsive protein 40 120 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1034 Dere-ChrDere08 14306418 14306840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1034 6 110 Calmodulin-binding Proteins AT3G43120 41.905 3.23e-18 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1034 08 14306418 14306840 Dere08g1034 08 14306418 14306840 ECH