Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g1029 ATGGCAGCTTTCTCTTCGTTCACCACGACCTTACTCCGCTGGTCAAGGTCCCGATTCATCGCCGAACCTGAACCTTTCCTTTCATCACATTCAATCCCATTCTCATTTAAAACCAAAACAAAGAAATCAAGTCAATTCCGATTGTTTTCAATGGCTGCTGAACCAAAAGAGTCACCTGCCAACAACCCCAGTCTCCAGGCAACCCCAGATGACGCAACTAAGGGATACATTATGCAGCAAATTATGTTTAGAATTAAAGACCCAAAAGTGAGCCTTGATTTTTATTCTCGCGTATTGGGCATGTCGTTGCTTAAGAGATTGGATTTTCCAGAAATGAAGTTCAGCCTTTACTTTTTGGGCTATGAGGACCCTGCGGCAGCTCCAAGTAATTCAGTTGATAGAACAGTTTGGACCTTTGCTCAGAAGGCTACTATTGAATTGACGCATAACTGGGGTACTGAAAGTGATCCAGAGTTCAAAGGGTATCACAATGGCAATTCAGAACCTCGTGGCTTTGGACACATTGGCATCACTGTTGATGACACATACAAGGCATGTGAAAGATTTGAGCGTCTGGGAGTTGAGTTTGCTAAGAAACCAGGGAAAATGAAAGGAATAGCATTCATTAAGGATCCTGATGGATACTGGATTGAAATCTTTGATCTAAAAACAATTGGAAATAGCAGCTGGTGCTGCTTAACATATTTCGATGTTACCTTCAGCCAGGTTACATGCAGGTCAACTTTGTTTTAA 753 0.421 MAAFSSFTTTLLRWSRSRFIAEPEPFLSSHSIPFSFKTKTKKSSQFRLFSMAAEPKESPANNPSLQATPDDATKGYIMQQIMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDPAAAPSNSVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVEFAKKPGKMKGIAFIKDPDGYWIEIFDLKTIGNSSWCCLTYFDVTFSQVTCRSTLF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g1029 250 CDD GlxI_Zn 78 220 - -
Dere08g1029 250 ProSitePatterns Glyoxalase I signature 1. 80 101 IPR018146 GO:0004462|GO:0046872
Dere08g1029 250 Gene3D - 51 226 IPR029068 -
Dere08g1029 250 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 37 227 - -
Dere08g1029 250 ProSitePatterns Glyoxalase I signature 2. 165 181 IPR018146 GO:0004462|GO:0046872
Dere08g1029 250 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 79 219 IPR004360 -
Dere08g1029 250 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 77 222 IPR037523 -
Dere08g1029 250 NCBIfam lactoylglutathione lyase 78 223 IPR004361 GO:0004462|GO:0046872
Dere08g1029 250 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 70 221 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g1029 Dere-ChrDere08 14267658 14270830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g1029 26 229 Calmodulin-binding Proteins AT1G08110 74.648 1.59e-110 316