Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0983 ATGGAACCTCCAGTTGCCAGATCGAGGGGTAGGCCGAGGAAACGGAGGAGAAAAGAAGATGAAAATGGGGCTGATGATCGGAGATCGGTTCCTGAAATAAAAAAACAAGCTCTGGGGACAAGATCAATTGCGTTGGTTGGTCGATATGTACTGAAAGATTTTCCGAGAAGTAAGGTTTTTCTTGGGAAGGTTGTATATTACGATCATGGATTGTACAGAATCAAATACGAGGATGGTTATTCTGAGGATTTAGATAGCACTAAAATTCGAGGAATGCTTCTTGATGACAGGGACTTCGATGATGATTTGACTCAAAGGAGGATTGAGTTAGATGGTTTAGTCTTGAAGAGTAGTGTGGACCCAGATGAAGATGTATGCGGGGTTGAGCCACTTGTATCTAGTGGATTGCATGGTGGGTTATCAATAGACAATGACGAAGAACAAATTGAAGCAGATGCTGATTCATCAAGTGGCTCATGCTCCGGTTCAAAGGAAAGAGATTCTGCGTCTGATGCTGAGACACCGCCTATACCACCATTGCAGTTGCCACCATCTTCCGGAACTATTGGTATCCCAGAGCCATATGTCTCACACCTCTTCGCAGTTTATGGATTTTTACGATCTTTCAGTACTCGCCTATTTCTTAGCCCGTTTTCTTTGGATGAGTTTGTTGGTTCTCTTAACTGCCGGGTTCCAAACACGTTGTTTGATGCCATTCATGTTTCTCTGATGCGTGCATTGAGGCGTCATCTTGAAATCCTTTCATCTGAAGGCTCAGAGCTCGCATCAAAATGTCTAAGGTGTAATGATTGGAGCTTGCTTGACATATTGACTTGGCCTGTTTTTGTGATTCAATATATAGTAATCAATGGATATACAAAGGGAGATGAGTGGAAAGGATTTTGTGATGACATTTATGATGGCGAATATTATTTATTACCTGCAAGTAGGAAGTTAATCATATTACAAAGTCTCTGCGATGATGTTTTGGATTCTGAGGAGCTAAAAGTTGAAATAAACATGCGTGAAGAATCAGAAGTTGGGATGGATGATGATGTAGAAGATATCTTTTATGCCAAAACTTCTGCTTGCAAGGACAACAAAGTTATGAAGTTTACTTTGGAATCAAATGCTGAGAAGCTATCTGGTAACTCAATTTCATTTATCAGTTGTACCGAAAAGACTGAGGATGCTGATGTTGATGGAAATGGAGATGAATGCCGCCTCTGTGGCATGGATGGGACCTTACTCTGCTGTGATGGATGTCCCTCTGTGTATCATTCAAGGTGTATTGGTGTGATGAAAATGTTTATACCAGAAGGGCCATGGTATTGTCCAGAGTGTAAAATTAATATGTCTGGGCCCAAGATTGCAAAAGGAACATCACTTAGAGGGGCTGAAATATTTGGAAAGGATTTGTATGGACAACTCTTCTTGGGTACTTGTGACCACTTACTGGTGCTCAATGTCAATGGTGAATATTGCATAAGATATTACAACCATAATGACATTACAAAAGTTCTTCAAGTGCTTTATGCATCCATGCAGCATAGACCTATATACTATGGTATTTGCTTGGCAGTTTTACAATGTTGGAATATTCCAGAAAGTGTCTTGCCTCTTTCTTGTACAACTGGGGCATATGTAAACTTGGCAGATACTGATGAAGATGCAAGGTTTCCTAGCTTATCACCTCCTTCTTTGGGTGTAGAAGATCTTGAAGCTGTTAATTTGGTGAAGGCAGAGCAACCTGTAATCACTGTGGTCCCATCTCTTGATGCCTCGTTGCTTACCACTGAAAGAGAATTTCCTGCTCCTGAAAGCAGTGGCAACTGTAGAGCTAGGGAGTGCCCTACCATGGATATGAAGCTTCCTTTGGAAACTAAGATGGAGTCAGTTGTCTCAGCTGGTTCTGTTACTCATCTCTCTGATGTAAACTATCAAAGTTCTTTTGATAGGCCTAGTGCAGTATACATGGGTTGCTCCTTTAAACCTCAGTCATACATTAATCACTATATACATGGTGATTTTGCTGCATCTGCTGCTGCTAAATTGGCCATTCTTTCTTCAGAAGATTTTAGGTCAGAGAATCATGTGTCAGACAATCAGACGAAAGTGACATCTGGAAACAATTATTTGCAAGCAAAAGCATTCTTCTTGACAGCCTCACGCTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGGTGTGGCTGGTGCCTTTCTTGTAAAGCCCCTGTTTCATGCAAGAAAGGATGTATGCTAAATCATGCTGCCTTAAGTGCCACCAAGAGTACTATGAAAATCCTTGCTGGTCTTTGTCCGGTGAAGAGTGGGGAAGGAATTCTACGTAGCATTATAACATACATTATCTACATGGAGGAAAGTTTACGTGGTTTGATAGTTGGGCCCCTTCTAAGTGCAAATTATAGAAAGCAATGGTGTATATGTGTGGAACAGGCAACAACATTGAGTGCTCTAAAGCCGCTGTTGCTTGAACTTGAGCAGAATATTCAGATACTTGCTTTTTCTGGGGACTGGGTTAAGTTGATGGATGATTGGTTGGTTGAATCTTGTATGATTCAAAGTGCTGCATGTAGTGTTGGAACAACACAGAAACGTGCACAGAGTGGGAGGCGTTACAAGAAACAGTCAGCTATTGAAGTTAGAGCTGATGGATGTCATGAAAAGAACTTCACCTGGTGGCATGGTGGCAAACTAACCAAGTTTATATTCCAGAAAGCAGTTTTGCCAAAATACATGGTCAGAAAAGCAGGTCGCCAAGGTGGGTTCAAGAAAATCTGTGGTATTTTCTATGCTGAGGGCTCAGAATTTCCTAAAAGAAGCAGACAGTTAGTTTGGAGAGCTGCAGTTCAAATGAGTAGGAATGCATCACAGCTCGCACTTCAGGTTAGATACCTAGATTCTTATCTTAGATGGAGTGACCTGATTCGTCCTGAGCAGAATCTGCAGGATGGAAAAGGTCAAGAGATTGAAGCTTCTGCTTTTAGAAATGCAAATATATGTGATAGAAAACTTGTTGAAGGCAAAATTTCTTATGGAATTGCATTTGGGAGCCAAAAGCATCTTCCTTCTCGTGTCATGAAAAACGTTATTGAAAGAGAGCAAGGTCCAGAAGGAATGGAAAAGTATTGGTTTATGGAAACAGACATTCCCCTGTATTTGGTGAAAGAGTATGAAAAAGGTAAAGATGTAGAGCCATCTTATAAAGAGCACTTAAATTTGGCATCTCAGTTGCGTAGAAGGCAGTTGAAAGCTACCTGCAAGAATGTATTTCTTTACCTCTCCTGCAAAAGAGACAAGTTGGATATTTTATCTTGTTCTATATGCCACCTGGGCCTTTCAATTAGGAATGCTTCCAAATGCGGTACTTGTCAAGGTTATTGCCATGGGGGCTGTTCTATAAGTTCAGTTTCTAGTAACAAAGAAGTTGAGTTTATGACGACATGCAAACAGTGTTATTATTCCAAACTGCTTCCTCAAAAAGAGACCAGCAATAAATCTCCAATCAGTTCCCTTCTCTTACAAGGACGAGAACCTAGCTCTGTGACAGTCTTGAAGGGACAAAGGTCTAACTGCTGTGACCAAACATTGACTTCTTCCTGGACTAAAGATACTCGTCCTGACTTGAAAAAAGGTGCTTCTGATTCCTTGTTGGCAACAAACAGCCGTTGCAGTAGCAGCAATAAAACATTGACATCTGCCAGGACAAAGGATACTCTCCCTGACTTGAAACAAGATGCTTCTGTGATCACCTCAGCAGCTAAAAGCCGTCGCAGTAACTGTTCTTGGGGTATTATATGGAAAAAGAAGAATAGTGAAAATACAGGCATTGATTTCAGGCTCAAGAATATACTTTTAAAGGGATGCTCTGGTGTGCCTCAATTGGAACCTGTATGCCATTTGTGTCGTAAGCCTTATAGATCTGATCTGATGTACATTTGCTGTGAGACATGCAAAAATTGGTATCATGCTGAAGCTGTTGAACTTCAAGAGTTGAAAATTTTTGACGTGTTGAGCTTTAAGTGTTGCAAGTGTCGCAGGATAAAGTCACCTGTGTGTCCTTACTCTGATTCGAAGTACCAGATGCCCGAGGACAAGATGACTCGCACAAGGGCTACAAAGAAAGAGCGTTCAGGAGTTGATTCTGATTCTGGAACTCTTTCTGAATTGAAAGAGAGTCAGCCTGCTTCCCCATTCTTTCCCATGGAGGATGCCTCCGGACATGAAACTGGTCCTTTGCTTTTCCCTCTTTCAAGTGTTAAGCTTATTACAGAACCAAAATTAGGAGTGAACGTTGAGTGGAATGCTTTCTCTGGTCCAGGGCCTAAAAGACTACCGGTGAGAAGGCATGTTAAATGTGAGGGGGATGGTTGTGTTTCTTTTGAAAGCAAACTCACGGATGCCAAATTTTTAACACACAATGAAACAAGTACTCTTTCCAAAACTGCAGAGAAGTCATCATCCCCTTCTGTAGAATATGACTCTGCCGTTCACCTTGACAGCAATCAGCTGAATGACAGTGAAAGTGTGAATTATCAACTAAATAGTAATCAATTTGAAGAAGTTGATGCATCTGAGCACTTGCCAAAATATTTGGAACATTCTTGTGCACAGGAAGGTGTTGCTGAATGTGAAACTGTTAGTTTAGTTGATAAATCGGAACCTGGAAGTGCTGCTCATAATTGTGGGCGATGTCTGCTGAAGGAGCCAGCCCCTGATATATCTTGTTTTTCTGGGTTCAACATTGACAAGGCAGTTCCAGCAGAAATCACAGGCTGGTTCAATGGATGTTTGACTGGTTGCAAGTGTCTCACTATGGGTGAGTTGAATGCTCAGCTTTTGTTCTTGGGCGTGACTGTCTGCACTGTGCGCTTAGAGGTCGATTGGCTCCGCCTGTGGTGCAACAGTTTCTGTGCTTTTGGCTCATTGAATGGTTGCTGCTTGCCGGCCGCTGATGGACCCAATCTTTTCGAATGCTTTTTCGCGGCCTTCAGACTGTAG 5040 0.4175 MEPPVARSRGRPRKRRRKEDENGADDRRSVPEIKKQALGTRSIALVGRYVLKDFPRSKVFLGKVVYYDHGLYRIKYEDGYSEDLDSTKIRGMLLDDRDFDDDLTQRRIELDGLVLKSSVDPDEDVCGVEPLVSSGLHGGLSIDNDEEQIEADADSSSGSCSGSKERDSASDAETPPIPPLQLPPSSGTIGIPEPYVSHLFAVYGFLRSFSTRLFLSPFSLDEFVGSLNCRVPNTLFDAIHVSLMRALRRHLEILSSEGSELASKCLRCNDWSLLDILTWPVFVIQYIVINGYTKGDEWKGFCDDIYDGEYYLLPASRKLIILQSLCDDVLDSEELKVEINMREESEVGMDDDVEDIFYAKTSACKDNKVMKFTLESNAEKLSGNSISFISCTEKTEDADVDGNGDECRLCGMDGTLLCCDGCPSVYHSRCIGVMKMFIPEGPWYCPECKINMSGPKIAKGTSLRGAEIFGKDLYGQLFLGTCDHLLVLNVNGEYCIRYYNHNDITKVLQVLYASMQHRPIYYGICLAVLQCWNIPESVLPLSCTTGAYVNLADTDEDARFPSLSPPSLGVEDLEAVNLVKAEQPVITVVPSLDASLLTTEREFPAPESSGNCRARECPTMDMKLPLETKMESVVSAGSVTHLSDVNYQSSFDRPSAVYMGCSFKPQSYINHYIHGDFAASAAAKLAILSSEDFRSENHVSDNQTKVTSGNNYLQAKAFFLTASRFFWPSSEKKLVEVPRERCGWCLSCKAPVSCKKGCMLNHAALSATKSTMKILAGLCPVKSGEGILRSIITYIIYMEESLRGLIVGPLLSANYRKQWCICVEQATTLSALKPLLLELEQNIQILAFSGDWVKLMDDWLVESCMIQSAACSVGTTQKRAQSGRRYKKQSAIEVRADGCHEKNFTWWHGGKLTKFIFQKAVLPKYMVRKAGRQGGFKKICGIFYAEGSEFPKRSRQLVWRAAVQMSRNASQLALQVRYLDSYLRWSDLIRPEQNLQDGKGQEIEASAFRNANICDRKLVEGKISYGIAFGSQKHLPSRVMKNVIEREQGPEGMEKYWFMETDIPLYLVKEYEKGKDVEPSYKEHLNLASQLRRRQLKATCKNVFLYLSCKRDKLDILSCSICHLGLSIRNASKCGTCQGYCHGGCSISSVSSNKEVEFMTTCKQCYYSKLLPQKETSNKSPISSLLLQGREPSSVTVLKGQRSNCCDQTLTSSWTKDTRPDLKKGASDSLLATNSRCSSSNKTLTSARTKDTLPDLKQDASVITSAAKSRRSNCSWGIIWKKKNSENTGIDFRLKNILLKGCSGVPQLEPVCHLCRKPYRSDLMYICCETCKNWYHAEAVELQELKIFDVLSFKCCKCRRIKSPVCPYSDSKYQMPEDKMTRTRATKKERSGVDSDSGTLSELKESQPASPFFPMEDASGHETGPLLFPLSSVKLITEPKLGVNVEWNAFSGPGPKRLPVRRHVKCEGDGCVSFESKLTDAKFLTHNETSTLSKTAEKSSSPSVEYDSAVHLDSNQLNDSESVNYQLNSNQFEEVDASEHLPKYLEHSCAQEGVAECETVSLVDKSEPGSAAHNCGRCLLKEPAPDISCFSGFNIDKAVPAEITGWFNGCLTGCKCLTMGELNAQLLFLGVTVCTVRLEVDWLRLWCNSFCAFGSLNGCCLPAADGPNLFECFFAAFRL 1679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0983 1679 Pfam PHD-finger 407 449 IPR019787 -
Dere08g0983 1679 SMART PHD_3 406 449 IPR001965 -
Dere08g0983 1679 SMART PHD_3 1311 1359 IPR001965 -
Dere08g0983 1679 SMART PHD_3 1118 1166 IPR001965 -
Dere08g0983 1679 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 297 340 IPR028942 -
Dere08g0983 1679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1306 1365 IPR013083 -
Dere08g0983 1679 MobiDBLite consensus disorder prediction 15 30 - -
Dere08g0983 1679 PANTHER PHD FINGER FAMILY PROTEIN 41 1501 - -
Dere08g0983 1679 SUPERFAMILY FYVE/PHD zinc finger 400 456 IPR011011 -
Dere08g0983 1679 MobiDBLite consensus disorder prediction 149 185 - -
Dere08g0983 1679 ProSiteProfiles DDT domain profile. 193 253 IPR018501 -
Dere08g0983 1679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 453 IPR013083 -
Dere08g0983 1679 MobiDBLite consensus disorder prediction 1377 1395 - -
Dere08g0983 1679 SUPERFAMILY FYVE/PHD zinc finger 1308 1365 IPR011011 -
Dere08g0983 1679 SMART testlast3 193 253 IPR018501 -
Dere08g0983 1679 ProSitePatterns Zinc finger PHD-type signature. 407 448 IPR019786 -
Dere08g0983 1679 MobiDBLite consensus disorder prediction 1377 1408 - -
Dere08g0983 1679 ProSiteProfiles Zinc finger PHD-type profile. 404 451 IPR019787 -
Dere08g0983 1679 MobiDBLite consensus disorder prediction 1 30 - -
Dere08g0983 1679 Pfam DDT domain 196 250 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0983 Dere-ChrDere08 13800691 13808345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0983 25 1467 PHD Transcription Factor Family AT5G35210 43.796 0.0 1093
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dere08g0983 DDT 9.7e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0983 08 13800691 13808345 Dere08g0983 08 13800691 13808345 ECH