Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0976 ATGGAGTTCTGGGGTGTTGAGGTTAAGCCTGGGGAGCCTGTTAAAGTAGATCCCCAAGATTTTGATGCATACATACACCTTTCTCAGGCAAAGAAGGACAAAGGAGCTGAACCTGTGGTTCTTTACTTAAAATTTGATGACAAGAAGCTTGTTTTGGGAACCCTATCAAGGGATAATTTCCCCCAGATTCCATTTGACATAGTTCTAGAAAAGGAGTTTGAGCTCTCCCACAATTCGAAAAATGGCAGTGTCTATTTCTGTGGATACAAAGCTGAAATTCCTGACGAAGAATATCCTTGA 300 0.4133 MEFWGVEVKPGEPVKVDPQDFDAYIHLSQAKKDKGAEPVVLYLKFDDKKLVLGTLSRDNFPQIPFDIVLEKEFELSHNSKNGSVYFCGYKAEIPDEEYP 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0976 99 Gene3D Nucleoplasmin core domain 1 95 - -
Dere08g0976 99 FunFam Histone deacetylase HDT1 1 95 - -
Dere08g0976 99 Pfam Nucleoplasmin-like domain 3 89 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0976 Dere-ChrDere08 13722844 13723768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0976 1 97 C2H2 Transcription Factor Family AT5G03740 49.505 8.39e-28 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0976 08 13722844 13723768 Dere07g0707 07 10424764 10431645 CCT
Dere08g0976 08 13722844 13723768 Dere08g0976 08 13722844 13723768 ECH