Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0965 ATGGACTTTCAGAATATTGAATCTCCATTTCCTTCATCTCCTTCTTCCTCTTCTCCATCATCGTCTTCTTCTCCGAGTCAGAAGAGGAAAACGGGAAGAAGAAAGTTCAAAGAGACAAGGCACCCAGTGTATAGAGGAGTTCGCAGAAGAAACGGCAACAAGTGGGTCTGTGAAGTCCGAGAACCAAACAAAAAGTCAAGGATATGGCTAGGGACTTACCCTACTCCTGAAATGGCAGCAAGGGCACATGATGCTGCTGCTCTCGCACTCAGAGGCACCTCTGCTCTTCTCAACTTTCCTGATTCTGCTTTTCTTCTTCCACTTGCCGCCTCATCTTCGCCTTCAGACATAAGAGCAGCTGCAGCAGAAGCAGCTAACAGTATCTCTTCTTCTTCTTGTCAGAACAACACAGATGATTCTTGTTTATTAGAGCTGAAGAGCATGAGCGATGAAAGTAGTAATAAGGCTTTTGCAAATTCTTCAAATATAAGCCGAGAGAGAAACAAGAATATGATGAACAAGGAAGAATCTAGGACACTGTTCTTGGACGAGGAGGCATTGTATAATATGCCGGCGTTGTTAGATAGTACGGCTGAGGGTATGCTTCTTACCCCACCCTCTATGAGTCGTGCAATGGATTGGGACAATATTGTTTCGCCTTCTTCTCATGTCGTAGACCTCACACTGTGGACACCTTGA 699 0.4492 MDFQNIESPFPSSPSSSSPSSSSSPSQKRKTGRRKFKETRHPVYRGVRRRNGNKWVCEVREPNKKSRIWLGTYPTPEMAARAHDAAALALRGTSALLNFPDSAFLLPLAASSSPSDIRAAAAEAANSISSSSCQNNTDDSCLLELKSMSDESSNKAFANSSNISRERNKNMMNKEESRTLFLDEEALYNMPALLDSTAEGMLLTPPSMSRAMDWDNIVSPSSHVVDLTLWTP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0965 232 FunFam Ethylene-responsive transcription factor 2 42 101 - -
Dere08g0965 232 CDD AP2 44 102 IPR001471 GO:0003700|GO:0006355
Dere08g0965 232 Pfam AP2 domain 42 92 IPR001471 GO:0003700|GO:0006355
Dere08g0965 232 SMART rav1_2 43 106 IPR001471 GO:0003700|GO:0006355
Dere08g0965 232 MobiDBLite consensus disorder prediction 1 27 - -
Dere08g0965 232 Gene3D AP2/ERF domain 43 101 IPR036955 GO:0003700|GO:0006355
Dere08g0965 232 ProSiteProfiles AP2/ERF domain profile. 43 100 IPR001471 GO:0003700|GO:0006355
Dere08g0965 232 MobiDBLite consensus disorder prediction 1 44 - -
Dere08g0965 232 MobiDBLite consensus disorder prediction 28 44 - -
Dere08g0965 232 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
Dere08g0965 232 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 230 IPR045277 GO:0003700
Dere08g0965 232 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Dere08g0965 232 PRINTS Ethylene responsive element binding protein signature 66 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0965 Dere-ChrDere08 13605177 13605875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0965 5 215 AP2-EREBP Transcription Factor Family AT4G25470 45.283 4.09e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere08g0965 AP2 2e-15 CL0081