Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0961 ATGGAGCCATGGCTCGAGGATCTAGCCGATGACCTCCAGAGCCTAAGTTTCGCCTCCACCACAACCACCACTGATATCAAACGGAGCACAAGCTCCGGCTCCGAGACTACCACCTTAACTGCTTCAACATCTGCCCACTTGGGTCCACTCTCACTCCCAACCACTAAACCCCACGCGCCTTCCTCGGACCCTTGCTGGGCTGCCATACACCGGATCCGATCAGAGTCCCCGAGCCGCCACATCGCCCCCTCGGACCTCCGGTTCAACCACCGGCTCGGCTCCGGCGACATAGGTTCCGTGTACCTCGCGGAGCTCAAGTGCGGCAATAATGGCGACGAGGGTTGCGTGCTGTTCGCGGCTAAAGTAATGGACAAGAAAGAGCTCGCGAGTCGGAGCAAAGAAGGGAGGGCGAGGACAGAAAGGGAAATTCTCGAATTGTTGGACCACCCATTTCTGCCTACTCTCTACGAGACCATAGACGCGCCCAAATGGATCTGCCTCTTAACCGAGTTCTGTCCCGGCGGTGACTTGCACGTGCTCCGACAACGCCAGCCCAACAAGCGCTTCCACGAACCCGCCGTCAGGTTTTATGCATCAGAGGTGGTGGTGGCTCTAGAATACCTTCATATGCTGGGGATAGTGTATCGTGATCTCAAGCCTGAGAACGTGTTAGTTCGATCAGACGGCCACATCATGCTCACCGACTTTGACCTCTCGTTAAAAAGCGATGATTCCACGTCAACGGCTCAAATCATTTCAGAACAAAACCCTCCTCCCTCGGCCCCACAGAATAAGGACTACCACGTGGATCCCCCTCCTTTCACCTCCTCTTCCTGCATACTACCCAACTGTATAGTACCTGCCGTATCGTGCTTTCACCCAAAACGCAAGCGCAAGAAGAAGCAAAGCCAGCGTAATGGGCCTGAGTTTGTAGCAGAGCCCATTGATGTCCGGTCCATGTCATTCGTTGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGTGAGGGACACGGCAGTGCGGTGGACTGGTGGACGTTAGGGGTATTTATATTTGAACTGTTTTACGGTGTGACACCTTTTAGAGGACTGGACAATGAGCTAACCCTGGCTAACATAGTGGCTCGAGCCCTTGAGTTCCCGAAGGAACCCGCCGTGCCGGCCACAGCAAAGGACCTTATCTCACAGTTATTGGTTAAGGACCCCACGAGGCGGCTAGGGTCAAAGATGGGATCGTCGGCGATCAAGCACCACCCCTTTTTCCAAGGTGTTAATTGGGCATTGTTGAGGTGTACACCTCCACCCTTCGTGCCCCCAGCTTATACTAAAGAAGCCGTATCTGATGAAAGTTGTCCCCAGACTCCTATTGATTATTACTGA 1383 0.5437 MEPWLEDLADDLQSLSFASTTTTTDIKRSTSSGSETTTLTASTSAHLGPLSLPTTKPHAPSSDPCWAAIHRIRSESPSRHIAPSDLRFNHRLGSGDIGSVYLAELKCGNNGDEGCVLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYETIDAPKWICLLTEFCPGGDLHVLRQRQPNKRFHEPAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKSDDSTSTAQIISEQNPPPSAPQNKDYHVDPPPFTSSSCILPNCIVPAVSCFHPKRKRKKKQSQRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPAVPATAKDLISQLLVKDPTRRLGSKMGSSAIKHHPFFQGVNWALLRCTPPPFVPPAYTKEAVSDESCPQTPIDYY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0961 460 FunFam serine/threonine-protein kinase D6PK-like 176 243 - -
Dere08g0961 460 Pfam Protein kinase domain 89 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0961 460 Pfam Protein kinase domain 319 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0961 460 Gene3D Transferase(Phosphotransferase) domain 1 318 440 - -
Dere08g0961 460 MobiDBLite consensus disorder prediction 247 262 - -
Dere08g0961 460 CDD STKc_phototropin_like 92 440 - -
Dere08g0961 460 ProSiteProfiles Protein kinase domain profile. 86 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0961 460 MobiDBLite consensus disorder prediction 21 58 - -
Dere08g0961 460 SUPERFAMILY Protein kinase-like (PK-like) 66 446 IPR011009 -
Dere08g0961 460 PANTHER FLIPPASE KINASE 1-RELATED 27 443 - -
Dere08g0961 460 SMART serkin_6 86 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0961 460 Gene3D Phosphorylase Kinase; domain 1 85 175 - -
Dere08g0961 460 MobiDBLite consensus disorder prediction 247 268 - -
Dere08g0961 460 MobiDBLite consensus disorder prediction 21 59 - -
Dere08g0961 460 FunFam serine/threonine-protein kinase D6PKL2 85 175 - -
Dere08g0961 460 FunFam serine/threonine-protein kinase D6PK-like 317 440 - -
Dere08g0961 460 Gene3D Transferase(Phosphotransferase) domain 1 176 251 - -
Dere08g0961 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0961 Dere-ChrDere08 13540806 13544620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0961 1 460 AGC Kinase Gene Family AT3G44610 66.596 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere08g0961 Pkinase 1.2e-32 CL0016