Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0934 ATGGCATCAGTTGGTGATGAATTGGCAAAAGGTGATGACATAGTGCAAGGCATCCATCTCGTCATTAAACTGCCATGTAAGCCCAGGGAAGGAGAAACTCACATGAAAATGTGGAATGTTACTCATGCTGAAATCTATCACATGAAAATGTTACTCATGCTGAAATCTATCACTTCTAAACTTCATGGCCAAGAAGCACTACCAATTCCTTACCATGAATTCTTAAACTGGTGCTTTTCTTTTGGGAGGCTTTCTTTCGAATTTCTATTTTTGGAGATTCACCTCCTTTTGTTTTCTTCCAAGGCCAGGCTCCCAAAACTCTGTTTCGTCTTCGATTTTCCATCTATTCAAACCCTCCCTCTCGGTTGGGAGATCTTCGAGAGACGACGATCAGAGAGAATGGCGGAAGAACATCGATGCCAAGCTCCACGCCTCTGCGCTAACAACTGCGGCTTCTTTGGTAGCCCGGCGACGGAAAACCTATGTTCCAAGTGCTACAGAGATTCACAGCTTAAGGAACAGCAATCATCCTCCGCCAAGTTGGTTCTCAACCAATCCCTCGCTCCTCCGTCTCCGACGACCTCGCAACCGGCTTCTTCGCCTGAACAGATCGCCGCTCCTTCGTCTTCTGTGGCACCCGATTCTCCACGTACAACCAACGAGGCGAAGAGCGGATCCCCGGAGCAGCCACCGGTCCAGCCGAGCCGGTGCACCACATGCAGGCGGCGCGTGGGGCTCACGGGATTCACGTGCAGGTGCGGGTCCACATTCTGCGGGTCCCACCGGTACCCGGAACAGCACGGGTGCGAGTTCGACTTCAAGGGTATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGCCCAGAAGCTCCGAAAGATCTGA 891 0.5174 MASVGDELAKGDDIVQGIHLVIKLPCKPREGETHMKMWNVTHAEIYHMKMLLMLKSITSKLHGQEALPIPYHEFLNWCFSFGRLSFEFLFLEIHLLLFSSKARLPKLCFVFDFPSIQTLPLGWEIFERRRSERMAEEHRCQAPRLCANNCGFFGSPATENLCSKCYRDSQLKEQQSSSAKLVLNQSLAPPSPTTSQPASSPEQIAAPSSSVAPDSPRTTNEAKSGSPEQPPVQPSRCTTCRRRVGLTGFTCRCGSTFCGSHRYPEQHGCEFDFKGMGREQIAKANPVVKAQKLRKI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0934 296 FunFam Zinc finger AN1-type containing 6 212 292 - -
Dere08g0934 296 Pfam A20-like zinc finger 144 167 IPR002653 GO:0003677|GO:0008270
Dere08g0934 296 SMART A20_3 143 167 IPR002653 GO:0003677|GO:0008270
Dere08g0934 296 Gene3D - 133 203 - -
Dere08g0934 296 SUPERFAMILY AN1-like Zinc finger 219 291 IPR035896 -
Dere08g0934 296 ProSiteProfiles Zinc finger A20-type profile. 140 174 IPR002653 GO:0003677|GO:0008270
Dere08g0934 296 PANTHER AN1-TYPE ZINC FINGER PROTEIN 142 296 - -
Dere08g0934 296 Pfam AN1-like Zinc finger 237 273 IPR000058 GO:0008270
Dere08g0934 296 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 145 191 - -
Dere08g0934 296 Gene3D - 208 292 IPR035896 -
Dere08g0934 296 ProSiteProfiles Zinc finger AN1-type profile. 231 277 IPR000058 GO:0008270
Dere08g0934 296 SMART AN1_Zf_4 237 274 IPR000058 GO:0008270
Dere08g0934 296 MobiDBLite consensus disorder prediction 186 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0934 Dere-ChrDere08 13186241 13190233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0934 134 296 C2H2 Transcription Factor Family AT3G52800 54.706 3.71e-45 149