Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0927 ATGCCAACTTTTCAGCTTCGGCTTCAGGAAAAAAGAAGAGAATGGTCTGAAGAGCCTTGCATGGCGACCCATAGAATAGGAGAAACTGGCTTATCTGAGTCAGGACCTTCAACTTCAACTCACCATGTCCCTTGTGGAGTTCTTCATGGGATTAACTTGCCTGCGTCGTCCAGCTTAATCAATCAAGGACCTGCTTTTGATTTTGGAGGGTTGGAAGAGGCAATTGTTCTGCAAGGAGTGAAGACTAGAAATGATGAAGCCAAAGCAACTTTATTCACAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCTATGAGATTCCAACAGACCCCAAGAGTAGGTGGTTCAAAGTTAGGAGGGGAAAGCACTGATTCAGGATCAGCTTTGAACACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCTCCCATAAGTAAAAAAGCATCTTCTTCAGATTATCAGGCTTTTGATCAGCAGCAGCTACAGCAACTGGAACAGGAGATAGCAAGCGATGCCTCAAGATGCAACACACAGAATCAGAATCAATCAGCTGCCAAACCACCTCAGGAAAAGAGGAAAGGAGTTGGTTCTACATCAGAGAAACAGCTTGATGCGAAGACATTGAGACGTCTAGCTCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTGAGAAAGAAGGCTTATGTGCAGCAGCTGGAGTCAAGTAGATTAAAGCTTTCCCAGCTCGAACAAGATCTTCATAGAGCGCGCTCTCAGGGACTCTTAGTAGGCTGTAGTGGTGATGCTGCAGGTGCCAACATAAGTTCTGGGGCTGCGATATTCGACATGGAATATGGAAGATGGCTGGAAGAAGATCGGCGGCAGACGGCGGAGCTGCGGCGGAGCCTGGAGGGGGCGGTGTCGGATAATGAACTGAGAGTGATGGTGGAGGGATATTTGTCGCACTACGATGAGATATTTCAACTGAAGGAAGTGGCTGCAAAATCAGATGTGTTTCATCTCATCAACGGCACGTGGACCACTCCAGCCGAGCGATGCTTCCTCTGGATCGCTGGTTTCAGGCCCTCCGATCTCATTGCGATGGTGATACAGCAGTTAGAGCCACTAGCAGAGCAGCAAATAATGGGGATGTATGGGCTTCGGCACTCGTCGCAGCAAGCAGAGGAGGCTCTCTCTCAAGGGCTCGACCAGCTCCAGCACTCTCTCCTCGACACCATCGTCGGCGGCCTCACCCTCGACGGCGTCCAACAGATGCTCCTCGCCATCACCAAGCTCTCCAATCTCGAAGGCTTCGTTCGCCAGGCTGATAATTTGAGACAGCAAACACTTCACCAGTTATGTCGATTACTAACAGTTCGTCAAGCTGCAAGATGTTTTCTTGTGATTGGAGAGTACTATGATCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCACGACCACGAGGGACATTGATCAACGATGAGAATTCATGCCACCAAATAACAACGAACTTGCCAATAGTTCAGTCGTCCCAGAACCATTTCTCGAGTTTCTGA 1551 0.4868 MPTFQLRLQEKRREWSEEPCMATHRIGETGLSESGPSTSTHHVPCGVLHGINLPASSSLINQGPAFDFGGLEEAIVLQGVKTRNDEAKATLFTGKPAATLEMFPSWPMRFQQTPRVGGSKLGGESTDSGSALNTISSKTEAQFEPESPISKKASSSDYQAFDQQQLQQLEQEIASDASRCNTQNQNQSAAKPPQEKRKGVGSTSEKQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQDLHRARSQGLLVGCSGDAAGANISSGAAIFDMEYGRWLEEDRRQTAELRRSLEGAVSDNELRVMVEGYLSHYDEIFQLKEVAAKSDVFHLINGTWTTPAERCFLWIAGFRPSDLIAMVIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLDQLQHSLLDTIVGGLTLDGVQQMLLAITKLSNLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYDRLRALSSLWASRPRGTLINDENSCHQITTNLPIVQSSQNHFSSF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0927 516 MobiDBLite consensus disorder prediction 178 192 - -
Dere08g0927 516 Coils Coil 166 186 - -
Dere08g0927 516 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 214 229 IPR004827 GO:0003700|GO:0006355
Dere08g0927 516 Coils Coil 230 257 - -
Dere08g0927 516 Pfam bZIP transcription factor 210 251 IPR004827 GO:0003700|GO:0006355
Dere08g0927 516 MobiDBLite consensus disorder prediction 104 161 - -
Dere08g0927 516 Pfam Seed dormancy control 294 368 IPR025422 GO:0006351|GO:0043565
Dere08g0927 516 MobiDBLite consensus disorder prediction 123 161 - -
Dere08g0927 516 MobiDBLite consensus disorder prediction 178 213 - -
Dere08g0927 516 SMART brlzneu 207 273 IPR004827 GO:0003700|GO:0006355
Dere08g0927 516 FunFam BZIP family transcription factor 210 259 - -
Dere08g0927 516 PANTHER TRANSCRIPTION FACTOR TGA9 155 486 - -
Dere08g0927 516 MobiDBLite consensus disorder prediction 198 213 - -
Dere08g0927 516 SUPERFAMILY Leucine zipper domain 211 252 IPR046347 GO:0003700|GO:0006355
Dere08g0927 516 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 209 253 IPR004827 GO:0003700|GO:0006355
Dere08g0927 516 ProSiteProfiles DOG1 domain profile. 276 484 IPR025422 GO:0006351|GO:0043565
Dere08g0927 516 Gene3D - 210 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0927 Dere-ChrDere08 13083086 13088961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0927 191 516 bZIP Transcription Factor Family AT1G08320 71.779 1.70e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g0927 DOG1 6.1e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0927 08 13083086 13088961 Dere07g0661 07 9731435 9738176 CCT
Dere08g0927 08 13083086 13088961 Dere08g0927 08 13083086 13088961 ECH