Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0912 ATGGCACCTAAGAAAGATAGTAAAGCACCTCCTCCATCCTCAAAGCCCGCCAAGTCAGGAGGAGGGAAGCAAAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAACAATATGGTTTTGTTTGATCAAGCAACATATGACAAGCTTCTTTCGGAAGTTCCGAAGTACAAACTAATTACGCCATCCATATTGTCTGACAGATTGAGGATCAATGGATCTTTGGCACGTCGGGCAATTAAGGAATTGATGGCAAGAGGTTCAATTAGGCTGATATCTGCTCATGCCAGCCAACAAATTTACACCAGATCCACCAATACCTAA 330 0.4303 MAPKKDSKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKELMARGSIRLISAHASQQIYTRSTNT 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0912 109 Gene3D - 22 109 - -
Dere08g0912 109 PANTHER 40S RIBOSOMAL PROTEIN S25 1 109 IPR004977 -
Dere08g0912 109 MobiDBLite consensus disorder prediction 1 37 - -
Dere08g0912 109 Pfam S25 ribosomal protein 10 105 IPR004977 -
Dere08g0912 109 FunFam 40S ribosomal protein S25 22 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0912 Dere-ChrDere08 12957733 12959372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0912 1 108 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 88.889 2.39e-52 158