Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0896 ATGTCTGTGAATAAGAGAAGCCTTTTGAGAACTCTTTTCACAGCAAATGGAGGGTGTGGTAATTGTGGCACACCAAAAACCTCTGACGTATACGACCCAACCCCTAGACCCAAAATCTGCATCCATCCAAACCCAAATCCCACTACCTTAACTTCCTCAAACATTCCCGGCGGTGGCCTCTCTGCCGACGACGACGGTGACGAAGAAGGTTTGACTTCCACGACCATCTCCGAGGATCAGAACAGCTCCAGGAATACTATAACTCGGAAACTCAGTGGGAGCATCGCCGTGGAGAAGAAGTCGGAGGACCCTTATAACGACTTCCGGGATTCCATGCTTCAAATGATGATTGAGAAAGAGATATACTGGGAAGCTGATCTTCAAGAGCTTCTTCAATGCTTTCTTAGGCTAAATTCCCCATGTCACCACCAACTCATCCTCAAAGCTTTCACCGACATATGCCATGAGGCTTCCCTGCCATGTCATTCCATTCGCACGTCCGAAGAAGCAGCATGCATGAAAACAATAAAACGTTAA 537 0.473 MSVNKRSLLRTLFTANGGCGNCGTPKTSDVYDPTPRPKICIHPNPNPTTLTSSNIPGGGLSADDDGDEEGLTSTTISEDQNSSRNTITRKLSGSIAVEKKSEDPYNDFRDSMLQMMIEKEIYWEADLQELLQCFLRLNSPCHHQLILKAFTDICHEASLPCHSIRTSEEAACMKTIKR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0896 178 MobiDBLite consensus disorder prediction 42 84 - -
Dere08g0896 178 NCBIfam uncharacterized plant-specific domain TIGR01568 95 155 IPR006458 -
Dere08g0896 178 MobiDBLite consensus disorder prediction 44 58 - -
Dere08g0896 178 ProSiteProfiles OVATE domain profile. 97 156 IPR006458 -
Dere08g0896 178 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 75 157 IPR038933 GO:0045892
Dere08g0896 178 Pfam Transcriptional repressor, ovate 101 155 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0896 Dere-ChrDere08 12844040 12844576 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere08g0896 Ovate 3.6e-23 No_clan