Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0881 ATGGCCTGCCAGATACTGATCGCCGAGAACTTGGATCCAGAGAGAAAGAGAAGTGGGGGCTTGAGGACTAAACAGGCGGGCAGAGGATCGTGCCGTGTTCTCAAGACTCTTTGCGGTCGGAATCAATGGTCTTATGGTGTCTTCTGGAAGATCGGCTGCCATAATCCCAAGCTGTTAATTTGGGAAGATTGCTATTATGAACCCTTGCCATGTCAATTTGCTTCGCGCATTGCTGGAATGGAGACTTCTAATTTGGCTTTTGGGAAAGGGGAAGGCTGTTGGCTTTCTTCTGATTCTCAGTCTTCTCAGCTAGGAACTCAAGAAGAGGACAGAGTCTGCTCTTTGATTAACAAAATGATGGTGAATAATTCAGTCAATGTCATCGGTGAAGGGATTATCGGGCGGGCTGCATTTACAGGAAACCATCAGTGGATTCTTTTCAACAATTTTACAAGAGATGGATGTCCACTGGAGGTATACAATGAGGTGCATCACCAGTTTTCTGCTGGAATGCAGACTATAGCAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCAATAATGGAGAACATGGGATTTGTGAATGATGTGAAGAGCCTGACCTTGCAATTGGGGTGTGTCCCCGGTGCTCTTCTATCTGAAGACTACTCAGCAAAAGCTTCTCTTGAAAGATTAGGTGCACCTATTACTGTTGGAGTGCCTGTGTCTGTTGATCCACCAGTAATCACCTCCAATTGCACACCCTCAGTATCTTATGGCTTCAACCAACACAGTAATTTGTCTCATATTTCAATGCCTATTGTTCAGCCATCACATCCTCTTAGGGGAGAGATGAATAAACATCCAGGTTCTCTATTGACACATCAAACCCCTAACGTTACTCATATATTATCCAATTACCATAATAACCTTTGCAAACCTAAGGTGTTACCAGTGATGAACCCCAGTTTTGATGGCCAACCAGAGAATTTAGTTTTGGAGGCAGCAGAAGTGATAACATCAAATCGTAATTCATTTCTGCAACAACATTCTGCTAAATTGAATGATCGATCTGAATCCAATGAATTAACTGACTTGAGCCAATCAGGTCTGCGTGACTGCAGCATAAAGTTTATGGAACAGCAGCAAAAGTTATCTGCCAGTGGGAGTCAAAATTATGTTAACCCAAGCATTAATGTATCAAATGCTTTAAACTTGTCTCAGCTGAAAACAAGTGGAGGCCTTGTACTTGACCACAGTCAGAGTTCTGTTAGTACTTCATTACCTGGAGGCTTCCCAACACATGATGGGATGAGTAGACTTTTGAGGCCAAGTCTGATTGCTGGCTCTGTTTCTAATCCTCTTAAAGTGGTTACCGCCAATTTTTGTGAAACCAGTAAAGCTGGGACTGGACTTCAAAATGATGATTCTAAAGGAAGTTATTCTCTACCTAATTTTACTAGTCAATCTGGTACTAGTCCCATGCCCCTGGAAAGCTCTGATCAGAAGAATGTCCGTGTTAGTTCAAAGCGTGGTTATGATAAGTTGGCTCCAACAGACCAAAGGATGGATGATGATCTGCTTCAGGCCCTTAAGATCCCATCTCTTCATCTTGGGGAGCAGCAGTTGTCTATGAGTGATCACATCCCTGCTTGTATTCCACCTCCATCAAGTGATGACCTGTTTGATGTTTTAGGTGTGGATCTTAAAAACAAACTACTGAATGAAAACTGCTATAAGTTGCTTGCTGAAGAATCAGATGCTGGTCCAGAAATTCTGTATAAAAAGCCAACATGTTTAAATTTGAAGGATACAGATCTTGAGAGTTATTCAATAAATGAGGCCATATCAGACAGTGGTGTCTTCTCTGAGAGGGGCACTGACCATCTTTTGGATGCTGTTGTCTCAAGGGCTAAGTCTTTCAGGAAAGAGGGTTCTGATGATATGTCTTGCCAGACAACATTGACTAGGATCAATAATGCTTTTGTTCCCTCTCCTACCTATAGGAAGGTTATGTCTGATCATGTTCAGGGTGGACTGTTTGGTATACCTAAAGTTGGGGGTAAAGCAGGTGTTGCAGAAACTAGTTCTCTTAGGTCTGGATGTAGCAGGGATGATGCTCGAAATTGTTCTCAAACTAATTCCATTTATGGGTCTCAACTTAGCTCATGGGTTGAGAATGCTACCAACGTGAAGTGTGAAAACAGTGTTTCAACTGGATACTCTAAGCGGCCAGATGAAGTTTGTAAATCAAATCGTAAAAGGCTTAAACCTGGAGAGAACCCCAGACCTCGACCTAAAGATCGCCAGATGATTCAAGATCGCGTGAAAGAGTTACGGGAAATTGTGCCGAATGGAGCAAAATGTAGCATAGATGCACTTCTTGAACGTACTGTCAAGCATATGCTTTTCTTGCAAAGTGTTACAAAGCATGCTGACAAGCTAAAACAAACGGGGGAATCTAAGATTAGTAGTAAGGAAGGCGGACTGCTTTTAAAAGACAACTTCGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTGAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAAGACCGGGGATTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTGGGGTTAACCATCTTGAAGGGGGTTATGGAAGCCCGAAATGACAAGATCTGGGCACGCTTTGCAGTAGAGGCAAATCGGGATGTAACAAGGATGGAGATATTTATGTCGCTGGTTTGTCTTTTGGAGCAAACAGGGAAGGGCAGTGCATCCCCATCCAATGCAATATATCAATCCATCCCTCAAGCACTCAGATAG 2856 0.431 MACQILIAENLDPERKRSGGLRTKQAGRGSCRVLKTLCGRNQWSYGVFWKIGCHNPKLLIWEDCYYEPLPCQFASRIAGMETSNLAFGKGEGCWLSSDSQSSQLGTQEEDRVCSLINKMMVNNSVNVIGEGIIGRAAFTGNHQWILFNNFTRDGCPLEVYNEVHHQFSAGMQTIAVIPVLPHGVVQLGSFLPIMENMGFVNDVKSLTLQLGCVPGALLSEDYSAKASLERLGAPITVGVPVSVDPPVITSNCTPSVSYGFNQHSNLSHISMPIVQPSHPLRGEMNKHPGSLLTHQTPNVTHILSNYHNNLCKPKVLPVMNPSFDGQPENLVLEAAEVITSNRNSFLQQHSAKLNDRSESNELTDLSQSGLRDCSIKFMEQQQKLSASGSQNYVNPSINVSNALNLSQLKTSGGLVLDHSQSSVSTSLPGGFPTHDGMSRLLRPSLIAGSVSNPLKVVTANFCETSKAGTGLQNDDSKGSYSLPNFTSQSGTSPMPLESSDQKNVRVSSKRGYDKLAPTDQRMDDDLLQALKIPSLHLGEQQLSMSDHIPACIPPPSSDDLFDVLGVDLKNKLLNENCYKLLAEESDAGPEILYKKPTCLNLKDTDLESYSINEAISDSGVFSERGTDHLLDAVVSRAKSFRKEGSDDMSCQTTLTRINNAFVPSPTYRKVMSDHVQGGLFGIPKVGGKAGVAETSSLRSGCSRDDARNCSQTNSIYGSQLSSWVENATNVKCENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTVKHMLFLQSVTKHADKLKQTGESKISSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEDRGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVCLLEQTGKGSASPSNAIYQSIPQALR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0881 951 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 755 804 IPR011598 GO:0046983
Dere08g0881 951 CDD bHLH_AtLHW_like 759 828 - -
Dere08g0881 951 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 33 944 IPR043561 GO:0003700|GO:0006355
Dere08g0881 951 MobiDBLite consensus disorder prediction 467 508 - -
Dere08g0881 951 MobiDBLite consensus disorder prediction 467 502 - -
Dere08g0881 951 MobiDBLite consensus disorder prediction 735 768 - -
Dere08g0881 951 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 34 206 IPR025610 -
Dere08g0881 951 MobiDBLite consensus disorder prediction 745 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0881 Dere-ChrDere08 12713831 12719560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0881 557 933 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 55.352 3.62e-114 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0881 08 12713831 12719560 Dere07g0597 07 9104066 9110227 CCT
Dere08g0881 08 12713831 12719560 Dere08g0881 08 12713831 12719560 ECH