Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0874 ATGGATGTCGATTCCTCGATGGCACCGGAAAGCGATCACGATCCGGCCGTGCAGAATCATACTGCTGCTCAGGCGCCGGCAGCAATGGATAGAGAACAGCTAGGAGAGCAGCCGTCGTCAGGAGGTGGATCTCCGGCACAGTCGCCGGTGCAGCAGCCACAGCCACAGCAGCAGGCGGCTGCTCAGGTGCAGCAGAGTCCGGTTGTTGGACCAAGGCTGGCGCCAACTTACACCGTCGTCAATGCAATTTTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCACACGTTGACGGCGGTGGCGGCTGTTGGAGAGGAGGGTACACCTGGATACATTGGTCCGAGGCTGATTTTGTTCGGTGGTGCTACTGCCCTTGAAGGCAATTCTGCGGCTGCTGGGACTCCTTCATCTGCTGGGAATGCTGGCATACGTTTAGCTGGTGCCACTGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTCGGAGAACCTCCAACCCCAAGGGCTGCACATGTGGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCTGAGGATCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTAATGGCTTTGGTGGGTCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGGAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCATAAGTTGGAGCCAGAAGGAGAGGGCCCGCCACCATGCATGTATGCAACTGCTAGTGCACGCACTGATGGACTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTGCCATTGGCTAGTGCATATGGACTTGCAAAGCATAGAGACGGTCGTTGGGAATGGGCAATTGCACCTGGTGTTTCGCCATCCCCTAGATATCAGCATGCAGCAGTGTTCGTTAATGCAAGGCTCCATGTGTCTGGAGGAGCTCTTGGTGGAGGGCGGATGGTAGAAGACTCATCAAGTGTTGCAGTATTGGATACTGCCGCTGGTGTTTGGTGTGATACAAAATCAGTTGTTACAAGTCCAAGGACAGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACACGGCGTTGTAGGCATGCAGCTGCTGCAATTGGTGACCTCATATTTATTTATGGTGGTTTACGTGGTGGAGTGTTGCTTGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAACTGCTGCTTCGCATGCTGCTGCTGCAGCGGCTGCATCTAATTTACAAGCAGGACGATTACCTGGGCGATATGGATTTATTGATGATAGGACCAGGCAAACAATGGCTGAAGCGACTGCTGATGGTTCAGTTGTTCTGGGAAATCCTGTTGCTCCCCCTATAAATGGTGACATGTATACTGATATCAGCACTGAAAATGCTATACTTCAGGGATCCCGGAGAACTAGCAAAGGTGTTGAGTATCTGGTTGAAGCATCTGCAGCTGAAGCTCAAGCTATCAGTGCCACATTAGCTGCTGCTAAAGCACGACAAGTGAATGGAGAAGTTGAATTGCCTGACAGAGACCGTGGGGCTGAGGCTACCCCAAGTGGGAAGCCAATATCTTCCTTGATTAAGCCTGATTCAGCAGGATCAGATAATATTGTTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTTATTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAACTTTCAATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGGACTCCAGAAAGTGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCTATCAATAGTGTCCCTAAGAAGGTCATAGCTCACCTATTAAAACCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGATTGCAATGAAATTGCAGATCTTTGTGATAGTGCAGAGCGGATATTTTCAAGTGAACCAACTGTCTTACAACTTAAGGCACCAATTAAAATATTCGGTGATTTACACGGGCAGTTTGGGGATCTTATGCGTCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGCCAACACAGCCTGGAAACTATAACCCTTCTACTTGCTCTGAAGGTTGAATATTCCAACAATGTACACTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATTGAATGTATTGAGAGGATGGGCGAGAGAGATGGAATTTGGGCATGGCATCGTATTAATCGTTTGTTTAATTGGCTTCCTCTTGCGGCTCTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTGGAACAGATTGAGAATCTTCAGCGTCCAATTACAATGGAAGCGGGGTCAATTGTACTTATGGATCTGCTGTGGTCTGATCCTACAGAGAATGACAGCGTGGAAGGACTACGGCCAAATGCTAGAGGCCCAGGGTTAGTCACTTTTGGGCCTGATCGTGTCATGGAGTTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCCCAGGGACATCTGATCACACTATTTTCAGCTACAAATTACTGTGGCACTGCAAATAATGCTGGGGCGATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCATCCATTGCCACCAGCAATGTCTTCCCCAGAAGCATCGCCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAATAGACCACCAACTCCAACTAGAGGTCGTCCTCAAGTAGCCAATGATCGAGGTTCCCTTGCTTGGATATAA 3027 0.4807 MDVDSSMAPESDHDPAVQNHTAAQAPAAMDREQLGEQPSSGGGSPAQSPVQQPQPQQQAAAQVQQSPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARTDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNLQAGRLPGRYGFIDDRTRQTMAEATADGSVVLGNPVAPPINGDMYTDISTENAILQGSRRTSKGVEYLVEASAAEAQAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPISSLIKPDSAGSDNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYSNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAMSSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0874 1008 MobiDBLite consensus disorder prediction 37 68 - -
Dere08g0874 1008 MobiDBLite consensus disorder prediction 985 1008 - -
Dere08g0874 1008 FunFam Serine/threonine-protein phosphatase 274 474 - -
Dere08g0874 1008 FunFam Serine/threonine-protein phosphatase 641 981 - -
Dere08g0874 1008 Gene3D - 641 982 IPR029052 -
Dere08g0874 1008 Gene3D - 72 272 IPR015915 GO:0005515
Dere08g0874 1008 Gene3D - 273 462 IPR015915 GO:0005515
Dere08g0874 1008 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1008 - -
Dere08g0874 1008 MobiDBLite consensus disorder prediction 1 68 - -
Dere08g0874 1008 SUPERFAMILY Kelch motif 149 438 IPR015915 GO:0005515
Dere08g0874 1008 PIRSF STPPP_BSU1 42 1008 IPR012391 GO:0004721|GO:0009742
Dere08g0874 1008 ProSitePatterns Serine/threonine specific protein phosphatases signature. 774 779 IPR006186 GO:0016787
Dere08g0874 1008 Pfam Calcineurin-like phosphoesterase 705 912 IPR004843 GO:0016787
Dere08g0874 1008 Pfam Kelch motif 335 381 IPR011498 GO:0005515
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 841 868 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 923 939 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 740 767 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 901 921 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 811 837 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 705 732 IPR006186 GO:0016787
Dere08g0874 1008 PRINTS Serine/threonine phosphatase family signature 773 797 IPR006186 GO:0016787
Dere08g0874 1008 FunFam Serine/threonine-protein phosphatase 73 270 - -
Dere08g0874 1008 SUPERFAMILY Metallo-dependent phosphatases 662 967 IPR029052 -
Dere08g0874 1008 MobiDBLite consensus disorder prediction 554 583 - -
Dere08g0874 1008 CDD MPP_Bsu1_C 657 959 IPR041758 -
Dere08g0874 1008 SMART pp2a_7 677 961 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0874 Dere-ChrDere08 12581203 12592869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0874 669 904 Calmodulin-binding Proteins AT5G63870 28.676 4.54e-25 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0874 08 12581203 12592869 Dere07g0588 07 8980986 8994095 CCT