Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0871 ATGGATCCCTTGATCCGCAAGCTGCGCCGCCACCTTCTTGCATGGCTTCACCGATCTCGCTCTGATCAAGTTTACTTTGTGAGGCGACTTTCGTACAAGGATGTTAAAAGGGCAACAGATGGTTTTCACAGAATCGTCTATAGCAATTCTCATATTGTTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAGTAAAAGATTTTGATCAAGGAAATGACATTTTCTACAGTGAAGTGCAATTCCTGGGGCGCTTGCATCATCGCCACCTTCTGTCACTCAAAGGGTTTTCCGTGAAACATAAGAGATTGCTCATTTTTGACAACATAGAGAACGGAAGCTTAAAGGAGCATCTAAATGATCCCCTGAAGACTCCCTTGAATTGGACAACAAGGTTACAGATAGCTCTTGGCGTTGTGGCTGCCCTGGAATACTTGTTTCTCTTCATTGAACAACCATTATGTCATGTCTCCATCAGCTCTAGCAATATCATGCTAGATGAGAATTTTACAGCCAAGCTATCTGATTTTGGCCTTCTTACTTGTGGAAATCCTGTTATGATGCCATTTTCAAAAGATGACAGCCTGGGGCAGAAAAGTGGTAACATAATATTCCAACTGGGAGTGCTCTTACTGGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGCTCTGATCTAATCCAATGGATACAAGAATCAAGCTTTTTCAGTTCCATACATAAGATGATAGACCCTGATCTTGGAGACAATTATGATTCTAGGGAGTTAAAAAACCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAGGGAAAAGCCTGAATTTACAATCCCCCAGTTATTTCGGTATCTTCAACAGAAGACCAGAGCATTGGCAGGTTTCAGCATCAAAGAAAACATTCCTTTGAAATTGACAATTGATGAACTCCAAAATGGGTTTGATCATGATGCTAGACCTATTGGAGATGTCAATACCCATTATTCATCTCCTACTTCACAAAAAGCACTGGAGGCTGCACTTAATCATCGAATTATGGAGGAAGAATGGGCTGCTGATTCCATATCATTTCTAGCCTATTTCATCCGAACTGAAATTTTAGTGTCAATTGTTCTTAATTCGATTGCAATGGGATCAAAGGGAAATATTGATATGATAACATTCTTTCTCTACATACTTGAGGTTCAGGAGTATCTTTATTCCCTGTTTAGTAGTCTTTCCTTTGCTTTCCACATAAGTTTCCCTTCAGATAATTATCACACCCGAAACTTGAAGCTAAGATCTGCAAGCAAGAAATCTAATGAAGATCCAAACCTTGCATGTCACGAAACCATCTCTGCTGGTTTCTTCACTTTCTGTGCATTTCCTTTTTTTCTTTTACATTGGGAGCTCAATGGAAGTGGGCATGCCATTCCTGAAAAACCTATTCTGCAGCCCAAGTACCACGTAGACTTCTAG 1470 0.4027 MDPLIRKLRRHLLAWLHRSRSDQVYFVRRLSYKDVKRATDGFHRIVYSNSHIVAYTAKFEDGSVSLVKEVKDFDQGNDIFYSEVQFLGRLHHRHLLSLKGFSVKHKRLLIFDNIENGSLKEHLNDPLKTPLNWTTRLQIALGVVAALEYLFLFIEQPLCHVSISSSNIMLDENFTAKLSDFGLLTCGNPVMMPFSKDDSLGQKSGNIIFQLGVLLLELVTGQSSEMEGSDLIQWIQESSFFSSIHKMIDPDLGDNYDSRELKNLLAVAKLCIKSREKPEFTIPQLFRYLQQKTRALAGFSIKENIPLKLTIDELQNGFDHDARPIGDVNTHYSSPTSQKALEAALNHRIMEEEWAADSISFLAYFIRTEILVSIVLNSIAMGSKGNIDMITFFLYILEVQEYLYSLFSSLSFAFHISFPSDNYHTRNLKLRSASKKSNEDPNLACHETISAGFFTFCAFPFFLLHWELNGSGHAIPEKPILQPKYHVDF 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0871 489 Pfam Protein tyrosine and serine/threonine kinase 66 184 IPR001245 GO:0004672|GO:0006468
Dere08g0871 489 Gene3D Transferase(Phosphotransferase) domain 1 114 298 - -
Dere08g0871 489 FunFam probable receptor-like protein kinase At1g49730 208 296 - -
Dere08g0871 489 Gene3D Phosphorylase Kinase; domain 1 11 112 - -
Dere08g0871 489 ProSiteProfiles Protein kinase domain profile. 32 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0871 489 FunFam Protein kinase superfamily protein 16 112 - -
Dere08g0871 489 SUPERFAMILY Protein kinase-like (PK-like) 24 266 IPR011009 -
Dere08g0871 489 PANTHER OS01G0253100 PROTEIN 25 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0871 Dere-ChrDere08 12551756 12557446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0871 28 304 Receptor kinase-like Gene Family AT3G19300 35.880 2.34e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Dere08g0871 PK_Tyr_Ser-Thr 1e-15 CL0016