Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0863 ATGCATAACGGTACGAATATGATGGATCCTGAGTTGATCAGAATGGCTCAGGAGCAGATGAGTCGCATGTCACCCGCCGACTTGGCTCGGATTCAGCAGCAGATGATGTCTAATCCAGAGTTGATGAGGATGGCCTCAGAAGGCATGAAGAACATGAGGCTTGAAGACCTTAAATTTGCTGCAGAACAGTTACAGAATTCCCGTCCAGAAGAAATGGCTGAGATTGGTGAGAAAATGGCTAGTACAACACCTGAAGAAATAGCAGCTATGCGTACACGTATAGATGCCCAGATTAAATATGAATTGAGTGCAGCTCAAATGTTGAAGAAGCAGGGGAATGAACTTCACAATCAAGGAAGGTTCCCCGATGCTATGCAGAAATACCAGCTTGCTAAGCAAAACATTAAAGACATTCCCTATTCCCAAAGTAGAAAGCTTCTTTTGGCTTGCTCACTCAACTTGATGTCCTGTTACTTGAAGACAAAGCAGTATGATGAATGCATAAAAGAAGGGTCTGAGGTTTTGGCATATGATGCTAAGAATCTCAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAAATAGGTCTACTAAAGGATGCTGTTACTGATTTGAGCGTGTCACTTGAAGTGTCCCCTGATGATGATAAAATTGCGGAGCTTTTAAGGGACACCAAGGAAATATTAAAGGAAGGTGGTGAGCATGCACCTGGAAGATTGGTAATTGAAGAGATAACTGAAGAAGTTGAAATTGTGCCACCTGGAAACTACAGAAGCTCACCTGTGGAACACACAATGGCTCAACCGAAGGGATCTGTTGACTCTTCTATAAGCTGCAGTACAGTCAACGAAGGAGATATGAAATCTAATACAGAGAGTTCAAATACATTGAAAAATGACCCAGAAGCTATAAGAGATGTCTCTCCTGATATGATTAGAACTGCCTCAATTATGAACAGCAAGATGTCTCCTGAGGAACTTCAAAAACTGCTCGACATGGCTTCTTTGTCTCAAGGGGATAACCAATTTTTAAGAGGAGGTTCCCCTGATTCTACTGTTAGCACAAGATCAAATACTAAAGTGACACCTGACATGTTCAAAACAGCGAGTGACATGTTTAGTAAAATGTCACCAGAGGATCTTCAGAGGATGTTTGACATGGCATCCTCATTGAAGGGAAAAGAATCAACTTCATCATCTGCAGCTGTAGACAAGAATGTGAGAAACACTTCCCTGTCAAACTTATCGTCCTCAGGTGCTGATGGAACTGATGCTTTTGGTGAATCTAGTTCTTCTCACAATGCTTTTTCAGATGTGAGAAATTCATCTCAGTCAAGTTTCTCATCCTCAAGTGCTGATTTTCAAGAACAGATTAGAAACCAGATGAAAGATCCGGCTATGCAACAGATGTTCTCATCAATGGTTAAAAATATGAGCCCAGATATGATGGCAAACATGGGCGAACAATTTGGTTTTAAGCTTTCACAAGAAGATGCGGCAAAAGCTCAACAAGCCATTTCATCCTTATCACTAAAGGACTTGGATAAAATGATGCGTTGGGCAGATAGGATTCAAAGAGGGACTGAAGGTGTAAAAAAGACGAAGAACTGGCTGCTAGGCAAACCTGGTTTGATCATGGCAATATGCATCCTCATTTTGGCTATCATTCTTTATCGACTGGGCTTCATTGGTGGCTAA 1698 0.4152 MHNGTNMMDPELIRMAQEQMSRMSPADLARIQQQMMSNPELMRMASEGMKNMRLEDLKFAAEQLQNSRPEEMAEIGEKMASTTPEEIAAMRTRIDAQIKYELSAAQMLKKQGNELHNQGRFPDAMQKYQLAKQNIKDIPYSQSRKLLLACSLNLMSCYLKTKQYDECIKEGSEVLAYDAKNLKALYRRGQAYKEIGLLKDAVTDLSVSLEVSPDDDKIAELLRDTKEILKEGGEHAPGRLVIEEITEEVEIVPPGNYRSSPVEHTMAQPKGSVDSSISCSTVNEGDMKSNTESSNTLKNDPEAIRDVSPDMIRTASIMNSKMSPEELQKLLDMASLSQGDNQFLRGGSPDSTVSTRSNTKVTPDMFKTASDMFSKMSPEDLQRMFDMASSLKGKESTSSSAAVDKNVRNTSLSNLSSSGADGTDAFGESSSSHNAFSDVRNSSQSSFSSSSADFQEQIRNQMKDPAMQQMFSSMVKNMSPDMMANMGEQFGFKLSQEDAAKAQQAISSLSLKDLDKMMRWADRIQRGTEGVKKTKNWLLGKPGLIMAICILILAIILYRLGFIGG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0863 565 MobiDBLite consensus disorder prediction 254 302 - -
Dere08g0863 565 MobiDBLite consensus disorder prediction 261 301 - -
Dere08g0863 565 SMART tpr_5 182 215 IPR019734 GO:0005515
Dere08g0863 565 SMART tpr_5 105 138 IPR019734 GO:0005515
Dere08g0863 565 SMART tpr_5 148 181 IPR019734 GO:0005515
Dere08g0863 565 MobiDBLite consensus disorder prediction 339 364 - -
Dere08g0863 565 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Dere08g0863 565 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 7 342 - -
Dere08g0863 565 SUPERFAMILY TPR-like 98 230 IPR011990 GO:0005515
Dere08g0863 565 MobiDBLite consensus disorder prediction 411 454 - -
Dere08g0863 565 Gene3D Tetratricopeptide repeat domain 92 236 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0863 Dere-ChrDere08 12438366 12443508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0863 102 231 Calmodulin-binding Proteins AT5G48570 34.532 7.74e-16 78.6