Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0857 ATGGATGGACAGAGGAATCACAGCGAGGAGCGAGGGATACGGAGTGAAGAGGAAGAGGGAGGCAACGTAGGGGGTGGACTCTCCATTGATTCAGATCCACTTGGGAGCTTCTTCGTCCACAATCCCATTGTTTTAAACTCTTTCCCAGAAGATAGCATCAGTAAGTGGAAGCCCAGTCCCGCCATGGATGGCTTCAATAAGAGGTCTCCACCCTCTACCCTCCCCTTCCAAGTCAACCTCAACTCTGCCCAAGATCCCCACCGCTCTCCTCCTCATCCCTCTCATGGCCTCAAGTCCCACATCGACGAGATGAACTTCTTCTCCAACACCAAAAAGGATCTGAATCTTCCCTCCTCCTCCTCCTGCTCCTCTGTCTCTGTCTCTGCCTCTGCCTCTGCTTCTGCTCTTTCCAAACATGATCTTTCCTCCTCTCCACCTCTCTTGCCTTTCAAAACTGGTCTGAATCTTCTTACTGCCAACACTAGCAGTGATCTTTCCATGGTGGACGATGGCTTGTCAGCTCTTTCAGAAGATAAAAGAGCTAAGGGCGAGCTGGCTGCTCTTCAAGCCGAACTTGAGCGAATGAAAGTGGAAAATCATCGATTGAGGGAAATGCTCGATGAGGTGAATAATAGCTATAATGGACTCCATTTGCATTACGTAAATATGATGCAGAATCAGAAGAGTGATCATGACGCTGAGGATCAGTTTAACGAAAAAGAAACAGGGAAGAAACAAACTGGGAATGGAGTGCTAGTGCCTAGACAGTTCATAGATCTTGGCCTCGCTAATAATCCTGATGCTGATGAGCCTTCTCGTTCTTCCTCAGCGGGAAGGGATGGATCGCCGCCGGGACATAACGTCGAAGTGGCTTCCAAAGAAATTGGCAGCAGAAAGAAAGGAATCAGTGATGAGGGACTCGTGCTTGAACAAGATAAGAAGGAATTTGGCAGGGCAATTGAAGGAGAGGATAGCCCTCCAGCTGAAGCTTTCGCCACTAACAAGATCCCAAGATTCAATCCTCCGGAAAACGTTGATCAAGCCGAGACTACCATCAGAAAGGCTAGAGTTTCAGTTCGAGCTCGATCAGAGGCACCCATGGCACGTTTTAGATTTCACATATTTTTTCTTTCAGAAAAGAAATTTAATTTAGCTAATCGAATATTGTTAATTAATTTCAGATTACGGATGGGTGTCAATGGCGAAAGTATGGGCAGAAAATGGCCAAAGGAAACCCATGTCCTCGAGCTTATTATCGGTGCACCATGGCTGCAGGTACAAAGGTGTGCTGAGGACAAAACAATCCTGATCACAACCTATGAAGGGAACCACAACCACCCTTTGCCTCCGGCAGCCATGACAATGGCACAGACAACCTCGTCAGCTGCAAGAATGTTACTCTCAGGATCAATGTCGAGCACAGATGGACTAATGAACGCAAATTTCCTCACAAGGGCACTCCTTCCATGTTCCTCTAGCGTGGCTACTATCTCAGCCTCAGCTCCATTTCCGACTGTTACATTGGACCTAACTCAAAACCCTAACCCCTTACAGTTCCCGAGGCCTCCGACCCAATTCCAGATTCCCTTCCCACCTCAGAACTTCGCCAATTCTCCTGCATCGTTGCTGCCCCAGATATTTGGTCAGGCGCTATATAACCAATCCAAGTTTTCTGGGCTTCAAATGTCTCAGGAAGCTGAGACTTCCCAATCGTCTCAGCAGGCGGCGCCGCTGCCCCCGCCGCCGCACCTGGCTGACACGGTAAGTGCTGCCACTGCCATTGCGGCGGACCCCAACTTCACAGCGGCTCTGGCGGCGGCCATCACTTCCATCATTGGTGGTGCTCAGCCAAACAACAACAGTAGCAATAATGGTAATCTCCCTGCCAGCAACAATAGCAATGGCAACAATAACAATGCCAGCGGAATCAGCAAAATCAGCAATTCGAATTTCTCAGGGAATTAA 1965 0.4875 MDGQRNHSEERGIRSEEEEGGNVGGGLSIDSDPLGSFFVHNPIVLNSFPEDSISKWKPSPAMDGFNKRSPPSTLPFQVNLNSAQDPHRSPPHPSHGLKSHIDEMNFFSNTKKDLNLPSSSSCSSVSVSASASASALSKHDLSSSPPLLPFKTGLNLLTANTSSDLSMVDDGLSALSEDKRAKGELAALQAELERMKVENHRLREMLDEVNNSYNGLHLHYVNMMQNQKSDHDAEDQFNEKETGKKQTGNGVLVPRQFIDLGLANNPDADEPSRSSSAGRDGSPPGHNVEVASKEIGSRKKGISDEGLVLEQDKKEFGRAIEGEDSPPAEAFATNKIPRFNPPENVDQAETTIRKARVSVRARSEAPMARFRFHIFFLSEKKFNLANRILLINFRLRMGVNGESMGRKWPKETHVLELIIGAPWLQVQRCAEDKTILITTYEGNHNHPLPPAAMTMAQTTSSAARMLLSGSMSSTDGLMNANFLTRALLPCSSSVATISASAPFPTVTLDLTQNPNPLQFPRPPTQFQIPFPPQNFANSPASLLPQIFGQALYNQSKFSGLQMSQEAETSQSSQQAAPLPPPPHLADTVSAATAIAADPNFTAALAAAITSIIGGAQPNNNSSNNGNLPASNNSNGNNNNASGISKISNSNFSGN 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0857 654 MobiDBLite consensus disorder prediction 622 654 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 561 585 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 292 322 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 228 344 - -
Dere08g0857 654 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 167 367 IPR044810 GO:0003700
Dere08g0857 654 Coils Coil 178 212 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 1 31 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 70 88 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 228 242 - -
Dere08g0857 654 MobiDBLite consensus disorder prediction 1 18 - -
Dere08g0857 654 Gene3D WRKY domain 422 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere08g0857 654 ProSiteProfiles WRKY domain profile. 425 449 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere08g0857 654 MobiDBLite consensus disorder prediction 59 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0857 Dere-ChrDere08 12340263 12344005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0857 152 626 WRKY Transcription Factor Family AT1G62300 44.311 6.73e-95 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0857 08 12340263 12344005 Dere07g0551 07 8547143 8549187 CCT
Dere08g0857 08 12340263 12344005 Dere08g0857 08 12340263 12344005 ECH