Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0817 ATGGTGGAACGGAAGCAGTTCAAGACCAGGCTATGTGTACCATATCAGAAAGGCCGCTGTTCGCGCCAGAATTGCACCTTTGCTCATGGGAATGCGGAGCTGCGGCGATTCTCTGGCTCATATAGTGGCAGGCAAGACTATTTAGGTAGTGACTTGAGAGGGAAACTTGACAGAAGGCATTTATCCCCTCGGAGGTTATCACCAGCAAGAGATGCAAGAGCCCACCAGACCATTCGTGAATACAGCCCAGTGAGATCCTCAGAGAAAAGAAGTGATAGGAAACGTAGGAGAGATAAGGGCATTACTGGCCAAAGTGATATCTCTGGAAGTTTGAGAGTCTCTGATAGAATCCAAGATCAACATAAAGAAGGAAAACTGCTTTCCTCTGGTGTAAGAAATTCTCTCGAGGAGCAGCTGAGGAAGGTACAGTTGGATATCAGCTCACTTGAGCACCAAAAGTTTCAACTAGGGGCCTGCTTGAATGAGAGCATTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTCAAGCTCAATTGTGCAAAGAGAATGAAGAATGTAAAAGGATCACCTCAAAAATAAGGAAATTTGTTAAAGCGCATAATCATAGCACTCGGTTACAAGATGAACTAAAGAGATCACAGACCCGACTTCAAAGGTTAGGAGATCAACTTGACTCGGATATTGCTAGAATTGGTGTCAATGAAGAAGATTTGAGTATTGATATTGTAAGCAATGCTGAGGACACGGGTCTTCCATCAATCATCAAACATCATGTGGAGCAGAGTGAAGCTTCTCCACACAGAAAAAGGCTGCATGTTGAGCGAGATGCTGTTGAAGAACCAAAACAAGATAAATCAAAAGCTGGGCATCTGGTTGAAACAGCCAGACCCAGGAAGCGTTCTCGGTGGAATTTGGCTGCTCAATCAAATGACAAGGGGGATGAGGGCCTTGAGGCTCCTAACAATGGGACTGAAGCAACTAGGTCCCTTGATCTTGAAGGCAGGCAGAAGAAAGGATTATCTAATTCTTCTAACAACCTTAGTTCAGAGAAGTTGAAGGAATTCAGGGTTCATGTGCCATCGACCAGCATGGCAGTGAATGTAGTTGATGAGGAATTTGAAATTGAACTTGATGACAAATTTGAGAAAGTTGAAACTGGAAACACGGAAAATGAGAATGAAGTGGCATTTAAGGCCAAGGGCTTACCACTTCTGCTTCCCCCAGTTCTGACTCCTTCTGGTAAGAATTATTCACAGTATGTGGGTGATGATGAAAATGTGGATGTGGATGGACTTGATGAAGAGGCACCAGTTGCACATATGGATATAGTCTAA 1341 0.437 MVERKQFKTRLCVPYQKGRCSRQNCTFAHGNAELRRFSGSYSGRQDYLGSDLRGKLDRRHLSPRRLSPARDARAHQTIREYSPVRSSEKRSDRKRRRDKGITGQSDISGSLRVSDRIQDQHKEGKLLSSGVRNSLEEQLRKVQLDISSLEHQKFQLGACLNESIQEVDSLNSRIQELQAQLCKENEECKRITSKIRKFVKAHNHSTRLQDELKRSQTRLQRLGDQLDSDIARIGVNEEDLSIDIVSNAEDTGLPSIIKHHVEQSEASPHRKRLHVERDAVEEPKQDKSKAGHLVETARPRKRSRWNLAAQSNDKGDEGLEAPNNGTEATRSLDLEGRQKKGLSNSSNNLSSEKLKEFRVHVPSTSMAVNVVDEEFEIELDDKFEKVETGNTENENEVAFKAKGLPLLLPPVLTPSGKNYSQYVGDDENVDVDGLDEEAPVAHMDIV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0817 446 Gene3D - 1 36 - -
Dere08g0817 446 MobiDBLite consensus disorder prediction 260 350 - -
Dere08g0817 446 Coils Coil 160 180 - -
Dere08g0817 446 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Dere08g0817 446 MobiDBLite consensus disorder prediction 54 112 - -
Dere08g0817 446 MobiDBLite consensus disorder prediction 262 302 - -
Dere08g0817 446 Coils Coil 132 152 - -
Dere08g0817 446 MobiDBLite consensus disorder prediction 54 102 - -
Dere08g0817 446 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 434 IPR045868 GO:0046872
Dere08g0817 446 Coils Coil 205 225 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dere08g0817 None None None