Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0812 ATGGATCCTCTATGTGAGTTTTGTGTAGTAGTAAGAGCTGTGGTGTACTGCAAGTCAGATTCTGCGCGTCTCTGCTTGGATTGCGATGGTTGTGTACACTCCGCCAACTCTTTGTCACGCAGGCATCCTCGTTCGCTCGTATGTGACAAATGCTATTCCCAACCAGCGATTGTCCACTGTGTGGATGACAAAATGTCTGTGTGTCAAGGTTGTGATTGTAATCAAAATGGCTGTTCGGGATTGGGACATACGCGTCTGGTGTTGCATTGTTACACAGGTTGTCCCTCTTTCGCTGAGATGTATAGGATATGGCCTTTTGCACTTGAGGCTATCGCTTCCTCTTCATGTGGTTTGGATCATAGTTCGGGATCGTTTAATACTTTGGCTAAAAATGGCAGCAAGGGTTTGGCGCAGCCACATAATAATGATGCATCCTCTAGTGGCAAGTTGAATGAAGTAGAATCATGTGCCAAGTATGAACTTTGGATGGCTCAATCTTCTACCCTTCTACCAAATCCATATTTCACGCCCCACTGCAGAGATCAACAAGTTTTCTTTCCTCAAGACTCTACCCTGCCAAAGGGATGTCATAATTCCAAGGATATTGAATTTCAAGATGGTGGTCTCTGTGAAGGTCTCAACATGGACAATGTTCAATTAAACTTTGAAAGTGCTAATGAAATATTTGATTGCTCCCAAGGTGCCACTGGTTACCAACTTGAGGATGGAGGATTGGATTGTCTATTAATGGAAAAAAACATGTCAGTTACAGAATCTAATGGCCTTATTCAGAATGCCACGGAGGCATCATCATCAGTCCCGCAAAATCGTGTGGACTTTCAATCATTGACGGGTGGTGGGTCAGGTAGTATGATGCAGGCAATGAACATTAAAACAAACTGTTTACTCATGGATCCTAGCTGCAACAGAAACATGAATTTGGGATTTCCTCAGGGTCAAGTTCATTCAGGCATACCACTTTCATTACCCAAAATCAATGGTGAAAGTGGCGCTACCAGTACTGACTTTCAAGATTGTGCCACTACAGATTTTAAAGATTGTGGGTTATCACCAGCACTGTTGACAGTTGATACACCATGGGAATCAAATTTGGAGTCTACAAGCCCACATGGAAGGGATAAAGCTTTAATGAGATACAACGAGAAAAAGAAGAATCGCACGTTTGTTAAACAAATAAGGTATGCGTCTCGAAAGGCAAGAGCTGATACTAGAAAACGTGTGAAAGGTAGATTTGTGAAAGCTGGAGAAGCATATGATTATGATCCTCTTAGATCTCCTGAATTTGATCGAACAAGTGAGATTGTCTGGGTTGCTGGACCTTTTGCATCACATGTAAACATCATCTGCAACCTCTTCTGGTGGGAAACCTTTGTGGAAACTAGAATGGTTTTCCTCTTCTCCAAATTTGCACATCTTCAGAAGCTCTATATGAATTTCAAACTAGTCCAGACTACCAGGGGCTTAAACACTCTCGCACATGGTCGCAAACCCAGCATTAGAATTCCACTTTTCCACGCCGTACCATGCGCGCCTAACAAGTTACTACAACTATGCGTGTCCTTCTTCCAAGTGCCATGTTCACCTCCAAAATGGGTTGCTGGAAGCCTTGTACACTCTATGCGCTCAAAGCTTTTTCTGAATCCCACCAAACCCCAATCTCTGATCAGCTTCATTATAGTCTCCTCTTCGATTTCCGCTGTTTGTCTTCTTGTATCGGTACTACTTCTACACAATTCTTTTCAAGCCTACTTACATTCTTCTTCACAGGATGTGTCGGCCCCGACCACTCTTGATCACGTCGTCTTTGGTCTTGCTTCAACCAAGGAATCATGGCCTAAGCGGAAGGACCATGTCCAGCTATGGTGGAAGCCTGGTCAAATGCGAGGATGTGTGTTCGTGGATAGCCTTCCTCCTCCTGAACCCCATGCCAGCAACGATACTTCTCTCCCTCCTCTCTGCGTCTCCGAAGATACTTCGCGTTTTCGTTACACTTACAGGAATGGTCTCCGATCAGCAATTCGAGTGGCGCGTGTTGTTGCAGAGACTGTGGCCCTGAATCATTCTGATGTGAGATGGTATGTGTTTGGGGACGACGACACAATTTTCTTTCCAGAGAATCTGGTCAAAACTCTTTCCAAATATGACCATTTGCTTTGGCACTATCGCGGCACACACTCTGAGATTTATGAGCAGAACCGTGTGCACAGTTTTGGCATGGCTTTTGGTGGAGCAGGCTTCGCTATCAGTTCCTCTCTAGCAAAAGTTTTGGCCAAGGTTTTTGATTCATGTATAGAAAGATATCCCCATCTCTACGGAAGTGATAGCAGGGTCTTCTCTTGTATCGCAGAGCTCGGTGTAGGATTAACAAAGGAACCTGGTTTCCATCAGGTTGATTTGCGGGGAGATCTCTTTGGTCTATTGGCTGCACATCCAGTGACTCCCTTGTTATCCCTACATCACTTGGATCACACAGATCCAATCTTTCCCAACATGACAAGCACACGAGCTCTACAACATTTATTTGAAGCCGTAAACGTTGATTCCCAGAGGATTTTACAACACACAGTTTGCTATGACAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGCTATGCAGTTCAGGTGTTCCCAAACCACATGTTTCTGCCAGATGTTCTGAACGTGCAACGAACGTTCAGTCAGTGGAAGAAGGGAAATGTTTTGTCAGGAGTATATACTTTTAATACAAGAGAACTTCACCCCGATCCATGTCGAAGACCCACCATATTCTATCTTGACAGTGTGTCTTCTGGCAAGGATGGCATCGTTAGCCATTATAAGAAATTCTTTCAGAACTGCTCGTATGATGCAGCATCACCCAAGAAACTGGAAAGAATCAAAGTTTTGACGAATAAACTCGACCTTGACAACAAACAGTTGCAGGCTCCTAGAAGGCAATGTTGTGATGTCTTGCGCTCAAGTGCTCGTGACTTTATGGAAATCGCAATAAGAGAATGTAAAGACGAAGACATGATTTATATGCACTGA 3051 0.4395 MDPLCEFCVVVRAVVYCKSDSARLCLDCDGCVHSANSLSRRHPRSLVCDKCYSQPAIVHCVDDKMSVCQGCDCNQNGCSGLGHTRLVLHCYTGCPSFAEMYRIWPFALEAIASSSCGLDHSSGSFNTLAKNGSKGLAQPHNNDASSSGKLNEVESCAKYELWMAQSSTLLPNPYFTPHCRDQQVFFPQDSTLPKGCHNSKDIEFQDGGLCEGLNMDNVQLNFESANEIFDCSQGATGYQLEDGGLDCLLMEKNMSVTESNGLIQNATEASSSVPQNRVDFQSLTGGGSGSMMQAMNIKTNCLLMDPSCNRNMNLGFPQGQVHSGIPLSLPKINGESGATSTDFQDCATTDFKDCGLSPALLTVDTPWESNLESTSPHGRDKALMRYNEKKKNRTFVKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLRSPEFDRTSEIVWVAGPFASHVNIICNLFWWETFVETRMVFLFSKFAHLQKLYMNFKLVQTTRGLNTLAHGRKPSIRIPLFHAVPCAPNKLLQLCVSFFQVPCSPPKWVAGSLVHSMRSKLFLNPTKPQSLISFIIVSSSISAVCLLVSVLLLHNSFQAYLHSSSQDVSAPTTLDHVVFGLASTKESWPKRKDHVQLWWKPGQMRGCVFVDSLPPPEPHASNDTSLPPLCVSEDTSRFRYTYRNGLRSAIRVARVVAETVALNHSDVRWYVFGDDDTIFFPENLVKTLSKYDHLLWHYRGTHSEIYEQNRVHSFGMAFGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDSRVFSCIAELGVGLTKEPGFHQVDLRGDLFGLLAAHPVTPLLSLHHLDHTDPIFPNMTSTRALQHLFEAVNVDSQRILQHTVCYDRWFSWTISVSWGYAVQVFPNHMFLPDVLNVQRTFSQWKKGNVLSGVYTFNTRELHPDPCRRPTIFYLDSVSSGKDGIVSHYKKFFQNCSYDAASPKKLERIKVLTNKLDLDNKQLQAPRRQCCDVLRSSARDFMEIAIRECKDEDMIYMH 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0812 1016 FunFam Fringe-related protein-like 594 852 - -
Dere08g0812 1016 SMART bboxneu5 1 47 IPR000315 GO:0008270
Dere08g0812 1016 Pfam Protein of unknown function, DUF604 738 989 IPR006740 -
Dere08g0812 1016 Gene3D - 594 831 - -
Dere08g0812 1016 PANTHER FRINGE-RELATED 568 1011 - -
Dere08g0812 1016 Pfam CCT motif 379 421 IPR010402 GO:0005515
Dere08g0812 1016 ProSiteProfiles CCT domain profile. 379 421 IPR010402 GO:0005515
Dere08g0812 1016 CDD Bbox1_BBX-like 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0812 Dere-ChrDere08 11893355 11902908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0812 566 981 Glycosyltransferase AT1G05280 55.300 2.02e-162 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere08g0812 DUF604 9.4e-107 CL0110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0812 08 11893355 11902908 Dere08g0812 08 11893355 11902908 ECH