Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0801 ATGGAAATGACAAGATCCGGCTATGCGGTTGTTTATGCCATTCTTCTTTGCGCGTTGGCTAATGGGGGCTCCGAAGGCAAGAGGTGGAAGCCGCAGGAGTTTCTCAATCATGCCTGTGATTTGTCGTCGTCGCCTCATGTAGACGGAAAAAAGTTAGAGCAGGCTGGGAAACATTGTAGGAAGGAATTGATAGAGAGGAACAATGGCGTTGAAGATTCTGACTTACATCCAGTGGAAGGGAGAAGTGACCTGAGATCTTCACTTCTAATAAAAGATAATATACGCAAAGCAACAGAGTTTCTGCCTCCCAACACCAAACAAAACCTTTTTGATTGCATGAGAATCAAAACTTCCAACATTCATGTTTCTCAAGAGAAGGCAGGGGTAAGGTTGCTTGCTGAGTCACCAGATATCCAGATTCCACCAACCACCCATCCTTCTCCTTCTCCTTCTCCCTCTCCCTCTCCCTCTCATTCTCATTCTCCATCTGCTTACCCTGGGCCTGCAGTTGCATCACCAATTGATAAAAAGTCAGACGATTCTCCATCTCTCGATCTCCCTTTTGATTCTCTTCTCCCGCCAGATATGTTTGTGCCATTTCCATCACCACCACCACCTTCTACATCTCCTAAACTTTCCACACCAAAACCTTCAGTGGATGCTCCTCCTCTCCCTGTACATAACGATCATCAGGGGCAAAAAGTCATTTTTGTTGCTGCTATAGCACTATGTGGAATCTCAGTATTATTATTAATCTGCATCAGCTGTTGCAAGCGAAGAGACAAAGACCCAAAAGAGGCACAAAAAGATGACAGCCCTTTACTCACATTAGCCTCAGGTGATGTTTTTGCTGGTACCCGAAAGTTTTCAGATTCACAGAAGTTTTCTGGTTTGGAAAACTCTGATAAGAAAGAATCTAGCACTATTAGCAATCTGCCTGCAAACCCTGAAGATAGCTCGCAGGCTGAGACAACATCATCTACAGGACAAGTGTCAACCCTTCCTCCTCCTCCGGGAAAATCAGCTCCTCCACCCCCTGGGCTGCCGCCGCCACCACCTGCTCCTCGTGCCCCACCACCTCCACCACCAAAAGTTGCTAAGGCTCCACCCATTCCTCCGAAAGCAATGCATGGTAGAAAGAAGAGTAGTGAACAGGGCAGCTCTAGTGATGGCGGTGAATCGGATGCTCCTAAACCCAAATTAAAGCCATTTTTTTGGGATAAAGTTAATGCGAAAGCTGATCAAGGAATGGTTTGGCAACAGATCAATGCAGGGTCATTCCAATTCAATGAGGAAATGATAGAGTCCTTATTTGGTTGCGGCAACCAGAACAAAAATGAACGCAGGAGAGAGGCTTCCCATGAACCTTCAATTCAATACATTCAGATTATTGACCCTAGAAAAGCACAGAATCTATCAATTCTTTTACGAGCGCTGAACGTGACAACGGAAGAAGTCATTGATGCCCTTAAAGAAGGTAGTGAGATTCCCGCTGAGATCATCCACGCGTTATTGAGGATGGCACTAACACCAGAAGAGGAATTAAAGCTTAGGTTATTCACTGGCGAACTTAATCAAATTGGCCCTGCAGAGAGATTTCTCAAGGTCTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTTTGATGTTCATGAGTGTCCTTCCAGAAGAGGTCTCGAATCTTAAGGATTCCCTTGCAACACTAGAGGTTGCTTGCAACAAGCTCAGAAAAAGTAGGCTATTCCTAAAACTATTAGAAGCTGTTCTGAAAACTGGCAATCGAATGAATGACGGCACCTATCGTGGAGGTGCTCAAGCTTTCAAGCTTGACACACTTTTGAAACTATCTGATGTAAAAGGAACCGATGGGAAAACAACTCTATTGCACTTTGTGGTTCAGGAGATTATACGTTCAGAGGGCGTAAGAGCTGTTCGTACAGAGAAAGCTAGCCACCCGAGCCTGTCTAGTGTGAAAACAGAGGATTTTATCGATGACACTAACGAAGAATCAGCAGCAGAGCATTATCGCAGCGTTGGCCTTCAGGTGGTTTCAGGTTTAAGTGACGAACTGGAAGACGTCAAAAAGGCAGCAGTTGTAGATGGTGAAGGGCTAACGGCTACAGTTTCAAAACTTGGCCAGTCATTGTTGAAGTGTAAAGAATTCCTCGACAATGAGATGAAGAGTCTTGACGAAGACAGCGAATTCCATCGCTCCCTGAAATGTTTTGTGGAGAAAGCAGCGGCAGATGTCACATGGCTGCAGGATGAAGAGAAGAGGATAATGGCTCTGGTAAAGAGCACAGCTGATTATTTCCACGGCACTGCAGGAAAAGACGAAGGGTTGCGTTTGTTTATGATTGTACGCGATTTCTTGATAATGTTGGATAAGGCATGTAGAGAGGTGCAAAATACAACAATGAAAACAGAAAAGGCTTCCAAGAAAGAGAGTCCAACTATGTCATCTCCTCCTCCGGAAACTCGGCAACCATTTGATATACATAGGCGACTCTTTCCAACAATCGCAGAGCGGCGCGTGGAATTCTCTGATTCCGACGACGAGAGCATATCTCCATAG 2580 0.4512 MEMTRSGYAVVYAILLCALANGGSEGKRWKPQEFLNHACDLSSSPHVDGKKLEQAGKHCRKELIERNNGVEDSDLHPVEGRSDLRSSLLIKDNIRKATEFLPPNTKQNLFDCMRIKTSNIHVSQEKAGVRLLAESPDIQIPPTTHPSPSPSPSPSPSHSHSPSAYPGPAVASPIDKKSDDSPSLDLPFDSLLPPDMFVPFPSPPPPSTSPKLSTPKPSVDAPPLPVHNDHQGQKVIFVAAIALCGISVLLLICISCCKRRDKDPKEAQKDDSPLLTLASGDVFAGTRKFSDSQKFSGLENSDKKESSTISNLPANPEDSSQAETTSSTGQVSTLPPPPGKSAPPPPGLPPPPPAPRAPPPPPPKVAKAPPIPPKAMHGRKKSSEQGSSSDGGESDAPKPKLKPFFWDKVNAKADQGMVWQQINAGSFQFNEEMIESLFGCGNQNKNERRREASHEPSIQYIQIIDPRKAQNLSILLRALNVTTEEVIDALKEGSEIPAEIIHALLRMALTPEEELKLRLFTGELNQIGPAERFLKVLVDIPFAFKRLESLMFMSVLPEEVSNLKDSLATLEVACNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRAVRTEKASHPSLSSVKTEDFIDDTNEESAAEHYRSVGLQVVSGLSDELEDVKKAAVVDGEGLTATVSKLGQSLLKCKEFLDNEMKSLDEDSEFHRSLKCFVEKAAADVTWLQDEEKRIMALVKSTADYFHGTAGKDEGLRLFMIVRDFLIMLDKACREVQNTTMKTEKASKKESPTMSSPPPETRQPFDIHRRLFPTIAERRVEFSDSDDESISP 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0801 859 MobiDBLite consensus disorder prediction 806 835 - -
Dere08g0801 859 MobiDBLite consensus disorder prediction 293 402 - -
Dere08g0801 859 PANTHER FORMIN-RELATED 226 840 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dere08g0801 859 MobiDBLite consensus disorder prediction 336 370 - -
Dere08g0801 859 Coils Coil 560 580 - -
Dere08g0801 859 SMART it6_source 391 811 IPR015425 -
Dere08g0801 859 SUPERFAMILY Formin homology 2 domain (FH2 domain) 404 814 - -
Dere08g0801 859 ProSiteProfiles Formin homology-2 (FH2) domain profile. 391 822 IPR015425 -
Dere08g0801 859 Pfam Formin Homology 2 Domain 393 796 IPR015425 -
Dere08g0801 859 MobiDBLite consensus disorder prediction 194 222 - -
Dere08g0801 859 MobiDBLite consensus disorder prediction 141 161 - -
Dere08g0801 859 MobiDBLite consensus disorder prediction 293 335 - -
Dere08g0801 859 MobiDBLite consensus disorder prediction 137 226 - -
Dere08g0801 859 Gene3D Formin, FH2 domain 398 823 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0801 Dere-ChrDere08 11770431 11774990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0801 389 848 FH2 protein (formin) Gene Family AT5G54650 61.422 0.0 566