Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0799 ATGTCATGGTTTCTACGGGATGCTATCAGGTCATGCAGAGAAAAGTTTGATGTGGGCGTCCTTCTATTGAGAGCTTGCCTGGAGAATGTAGTGGTGGACAGACGAGTTGCTGGCTTTAAAACAACATATGTGGTGCAGTGGAATGATTGCATTATATCACTCCAATGCAAACCTCAGCCTGGGAATGGATTTGAAATCGATACACATTACAGTCATGTTGGTTCAACTCGTCAGCTTCGCTGTCCCGGTGCCGATGACACCACCGCCTCCTCCTTGGACCCAATGTTTTCCGGCATCAGCCTTCAGTCTATTCTCAGCCTCAACCCCACCGTCTTTTCTGATTACACCGCCGGCGCCGGGCTTCCCAGTCTTGCCTTTCTAGCGGATGATTGTCTGTCTCTGAATCTTCAGGGTGAAGTCACTCAGGCCTCTAACATTGAGGACCACATGGCAGAGACAAAACAGAAGAAGCCGCCTGTGGTGCTCAAATCTGAGACCTGTCTCTTTGAAGACGTCGCCACCCCTGGGACCACTTCTCACCCCTTCGACTTCTTCTCCAATCACTGCCCTTCCCCCTTTTACGATTCATCAACCTTTAACCTTCTCCCTCAACTCCAATCCATGGAGTCCTTTTCTCAGAAACGCCGTCGCTTCGACTCCCTCATTCCTGCCCCAAACACCATGACAGCGCCGGCTCCCGCGCACCACAATCTTCACCCTGCCACCGTCAACAACAACCTCTTCGCTGTCACGCAGCCGTACAACAGTAAACCATCTTCGGTGGATGCTCCGGTTGGTGAAAAATCCTCCCCAGTGATCCCTCAAAGCAACCTGGCACGTCAGCGGCGGCAGAAGCTGAGCGACAAGACTCGATGCTTACAGAAACTGATGCCGTGGGACAAGAAGATGGACCAAGCCACGCTTCTGGAGGAGGCCTACAAGTACGTCAAATTCCTACAGGCCCAGTTCAATGCTCTCCAATCCATGCCCTCCGATTCACCTTTCCTATCCCACGCTGGTACTTCCCAACCCGCCATTCAAAATGGGGACGTATTCGGGGATTTGGAGAGGTTGAATCGCAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCTGTTGCTCAAACCAGACTCTACTCCCAAGGTTTCTGCGTGTTCTCTGTGGAACAATGGGCTTTGCTGTGTTCATTCGTTGATGTGATAAAGTCTGAATTCATCGTTTCTAAAGCCCGAACCCGTGATGCTTTGGGCTGTTTCATGTTGGGAACCTTATGGGCCTTTGAATATCTCTTCTTGAAACTAAGTAGCAAGCAAACCAGAAACAGGGATAGGGAAAAACTCCTCGCAGAAATGGCCAGAGGGGCAGGCATTTTTCTGTGTTTCTTGATCGTAGTCATGGATGCTGCAGCTGGGTTCCTGGGCATCAAGGCTGAAAGTGAACAAAACAAGGTTAAGCACTTGAGATTGTGGATATTCGAGTGCAGAGAACCAAGCCATGAAGCTTTCATCCTGGGGTTGGGTGCGGCAGCACTGCTGGGGCTAGCCCATGTTATAGCCAATTTGCTAGGTGGCTGCAATTGCCTTTGTTCTCAGGAAGACCTTGCAAAGGCTCCTCCCAATAGGCAACTCTCTGTGGCTTGCCTCATTTTAACCTGGATTGCATTGGCTGCTGGAATGTTCATGCTGGTGATAGGGACTTTGTCAAACAACAAGTCAAAGGATTCATGTGGTATCTCACACCATCATTTTCTGTCCATCGGAGGGATCTTGTGTTTTGTTCATGGCTTATTCAGTGTTGCATATTACGTTTCTGCCACTGCCTCTGTTGATTAG 1830 0.5 MSWFLRDAIRSCREKFDVGVLLLRACLENVVVDRRVAGFKTTYVVQWNDCIISLQCKPQPGNGFEIDTHYSHVGSTRQLRCPGADDTTASSLDPMFSGISLQSILSLNPTVFSDYTAGAGLPSLAFLADDCLSLNLQGEVTQASNIEDHMAETKQKKPPVVLKSETCLFEDVATPGTTSHPFDFFSNHCPSPFYDSSTFNLLPQLQSMESFSQKRRRFDSLIPAPNTMTAPAPAHHNLHPATVNNNLFAVTQPYNSKPSSVDAPVGEKSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNALQSMPSDSPFLSHAGTSQPAIQNGDVFGDLERLNRNQVLQVLVNSPVAQTRLYSQGFCVFSVEQWALLCSFVDVIKSEFIVSKARTRDALGCFMLGTLWAFEYLFLKLSSKQTRNRDREKLLAEMARGAGIFLCFLIVVMDAAAGFLGIKAESEQNKVKHLRLWIFECREPSHEAFILGLGAAALLGLAHVIANLLGGCNCLCSQEDLAKAPPNRQLSVACLILTWIALAAGMFMLVIGTLSNNKSKDSCGISHHHFLSIGGILCFVHGLFSVAYYVSATASVD 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0799 609 Gene3D - 274 332 IPR036638 GO:0046983
Dere08g0799 609 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 195 389 IPR045843 GO:0003700|GO:0006355
Dere08g0799 609 Pfam Protein of unknown function (DUF1218) 507 594 IPR009606 -
Dere08g0799 609 SMART finulus 276 325 IPR011598 GO:0046983
Dere08g0799 609 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 270 319 IPR011598 GO:0046983
Dere08g0799 609 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 329 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0799 Dere-ChrDere08 11758223 11764762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0799 282 389 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 48.148 2.73e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere08g0799 DUF1218 1.7e-18 No_clan