LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere08g0798	ATGGGCGATGGAGGCGTCGCATGCATGCCTTTGCACCAGCAGGAGCATATTATGGAGAGATTGCCGAATGCAGAAAAAACGCTTTGCGGAGGCAAAAATGGGAATGGGTTCAATTCTAAGTTGCTCAAGTTTGCAGACAGTGAGCGGAAGAAGAAGATGAAAGTGAAGAAAGAAGAGCCAGCAAAGAAAGTACAGGTGGAAAGGAGTCAATTTGTATCGGAGAGAGTAGACCAGAGCAACGATGAAGTTGAGAATGATGAAACGTACGTGGAAAAAGTACAAAAAGAAGAAATGGAAGAGGGTGAATTAGGCACCATGAAGTGGTCAAAAAATGACCTTGAAAATGGAGAGTTTGTGCCGGAGAAGCCACGGAGAGGTGAAATTGAGAATGGAGAGATTGTCACTGAGAAATGGAAAAAAGGAGAGCTGGAGAAGGGAGAGATTGTTTATGGAAAAGGGAGAAGGGAGGATGTAGAAAAGGGGGAGATAGTTCCTGAGAGGGGCAGGAAAGGAGAGGTTGAGAAAGGGGAGTATGGCTCGTGGAGAGGTATAAAAGATGACATTGAGAAGGGAGAATTCATCCCTGATAGATGGCATCGAGGAGAAGTGGGGAAGGATGATCATGGTTACAGTAGACTGCGTAGGTATCAATCAGGCAGGGACAAAGGGTGGAAAAATGAACGTGAACGCACACCACCTTCTGGGAGATATTCAGGTGATGATTATATTAGAAAGAAAGAATTTAATAGAAATGGGAGTCAACATGCTAAGAGTGCTCCTCGGTGGGAGAGTGGACAAGAGAGGAATGTAAGGATCAGTTCAAAGATTGTGGATGAGGAAAAAAATGAACATAGCAATGGTAGGAACCATGCTCGGGATTACTCTGTTGGTAGTCGGTTGAAGCGGCATGGTAATGATTCAGACAGCAGTGAACGCAAGCATTATGGAGATTATGCTGGTTTAAAGAGTCGAAGGCTTGCTGATGACAGCTGTCGCCCTCTTTATACAGAGCACTATTCTCGTCGCTCTGTGGAGAGGTCTTATAGAAATTCTTCTTCAAAATTATCAGCAGACAAGTATTCTCGGAATCATGAATCTTCTTTACCTACTAGACCAGCTTATGACAGGCATGGACGCAGCCCTGGTCATTCTGAGCGGTCCCCGCGTGATCGCACAAGGTATTATGATCACAGAGATCGCACTCCAGTTCGTCGTGACCGGTCCCCCCTCGGTCGTGATAGATCTCCATATATTCGGGAGAAATCCCCTCATGGCCGTGACAGATCTCCATATATTCGGGAGAAATCCCCCCATGGTCGTGAGAAGTCTCCATATGAAAGGATCTGGGATAGAAGCCGTTACAATGATCATAAAATAAGAAGTCCAACTCATGTGGCTGAACGGTCCCCACAAGATAGACGTCGGCATCATGATCAAAGGGACCAGACGCCAAATTTGGTAGAACAGCCACCCATTGATAGACCTAGGCAAAATAGTCATAAAGAGACAAGCTCTAAAACAATTTCAAGTGAAAAGCACAACTCGCCACATAGTTGTAAGGATGATGAAGACAAGCACATCCATAATGAGCCCAGTTGTTCTGGTACCGAATCTCATAGTGACAGAAGTTTGCATGATGTAAATGGGTCTATTGTGAAAGACAAATATGAGAAAACTGAAAAGGAACCGCTCTCCTGCAGCCCATCTGTAAGCTGCAGGGAATCTCCCCACTTTGAGCCACCTCCTGAAGAGCTGCCTTCTATGGAAGAAGATATGGACATATGTGATACTCCTCCGCATGTTCCTGTGGTGGCGGATTCGTCATCAGGGAAATGGTTTTACCTTGATTATAGTGGTGTAGAACATGGGCCTTCTAAATTATGTGACATCAAGATTCTTGTTAACGAGGGGATACTGATGTCAGATCACTTTGTCAAGCACCTGGATAGTGACAGGTGGTTAACAGCTGAGAATGCAGCATCACCATTGGCAGCTCATAGTCTTCCGTCCATTGTGTCTGACAGCATAACTCAGCTGGTAAGCCCCCCAGAAGCTCCTGGTAATCTTCTAGCAGATCCTGGAGATATCCTTCAATCTGGACCTGAGAATTTTCAGGAGATGCCAACTCCTTTGCTGCAACAAATGGTATGCTCTAATGACACTCTGTTTACATCTGAACCTTTAGAGGAATTCCACATTGATGAAAGGGTTGGAGTTTTGTTAGAGGGTTATGAAGTAATTCCTGGGAGGGAGCTCGAGGCAATAAAAGAAGCTTTGCAAATAAATTTTGAATATGCAAATTGGGAGGGATTCAGAGACTATGAAGGTTTTCCTTGGCATGATGGTTGTCTTAATGAAGAACGTGATTCAAGAACTGATTTTGCATCAAGAGACTCTGAGGCTCAGTTAAGTATGCTCTTTGACAAGGATAATGGATTTGCCTTTGGTGACCCTGTTGACTGGTTTTCTGCCCGATGGTCGTGCAAAGGTGGTGACTGGAAGAGGAATGACGATGTCCAAGATAGATCTTCTAGGAAGAAACTTGTCCTAAATGATGGGTTTCCACTATGTGAAATGCCAAAGTCTGGATGTGAAGATCCACGCTGGCCTCGAAAAGATGATTTGTATTATCCTTCTCAAAGCAGGAGGCTTGATCTCCCTCTTTGGGCTTTTTGTGCTGATGAGAGGGTTGACAGTGGTACTGTAAGCCGATCAGTTCAAAGTAAACCCTTTTTTGTTAGAGGAGTGAAAGGAAATGCGCTTCCAGTGGTAAGGATAAATGCTTGTGTGGTCAAGGACCAGGGATCACTGGTTTCTGAAACAAGGCACAAAATCCGAGGCAAGGATAGACATCATTCAAGGTCTACTCGCCCTTTCTCTTCAACCAGTGATAGCAAGAGATCATCAACTGAAGAAGATTCTCAGTCAAAAGCTGTTAGTGATCAAGGTTCTTGCCTGAGCATGGAATTTGTCACCACTCCCAAAGACCGTCTCTGTACTGTCCATGACTTGCAGTTACATTGGGGTGACTGGTATTATCTTGATGGTTCTGGACGTGAAAGAGGGCCTTCATCATTTTCAGAGCTACAGGTTTTAGTTGATCGAGGAATTATTAAAAAATATAGCAGTGTTTTCAGGAAATGTGATAAACTCTGGGTTCCTGTTACCTCTGCTGCAGACACTTCTGATGCCAGTCTTGGGAGCCACCTGGAAAGCAGCTCAACAGGTGGCAAATGTTCTGGACTTCCGTTGCTGCAAACTCATGCTGTCTTGTTCAGTGAAACAAACAATAATACAAGTTTGTTTAACAGCATACACCCTCAGTTTGTTGGTTACACTCGGGGGAAGCTACATGAATTGGTAATGAAATCCTATAAGAGCCGGGAGTTTGCTGCAGCTATAAATGAGGTTTTGGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAAATGAGAAACAACTATATTGGAAATCAGAAGGTGAAGCACGTGCTGCCAAAAGAGCCCGAATTCTGGTTGATGATAGTGAATGGGACAGTGATATAGAAGATGGTAGCTTGACTCTCCAGAAGAATGAATCCACTTTTGATGATTTATGTGGTGATGCTACCTTCAATGGAGAAGAAAGTGGTATTACTCTTTCTGAGGTTGGAAGCTGGGGCTTATTGGATGGTCATACGTTGGCACGTGTCTTCCATTATTTGAGATCTGATTTGAAGTCCCTTGTCTTTGCATCATTGACTTGCAAGCACTGGAGAGCTGCTATCCTGTTTTGCAAGTCAGTTTCAAGACAGGTCAATTTGTCATCCTTGGGTCATTCTTGCACTGATTCCATGTTATGGAGCATTATGAATGATTATGAGAAAGATAAGATTAGCTCTATGATTCTAATCGGTTGCACCAGTATTACTGCTGACATGCTTGAGAAGATTCTTCTTTCATTTCCTCTTTTATCTACAATTGACATTAGAGGGTGCAGCCAGTTTAATGAGTTGACTCCTAAATTTACCAATGTGAAATGGATCAAAAGCCGCAGTTCATGCTTGACCAAAACTGCAGAGGAGCCACATAGAATTAGAAGCCTTAAACAGATCACTGAGCAAACTTCATCTGTTTCCAAGACCAGCAGTCTAGGTACCATGGATGATTTTGGTGAACTGAAGGACTATTTTGATAGTGTGGATAAGAGAGACACAGCAAAGCAATTATTCCGTCGAAACTTATACAAGAGGTCAAAACTGTATGATGCCAGAAGGTCTTCTTCCATTCTATCCAGGGATGCTCGTACTAGACGATGGGCAATCAAGAAATCTGAAAATGGTTATAAGAAGATGGAGGAGTTCCTTGTTTCTAGTCTGAGGGAAATTATGAAGGCAAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAAGCTAAGATGAAAACTGGTTATTACAGTGGTCGTGGGTTGAGCTCTGTCAAGGAGGACATCAGTAGGATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGGTGATGTTGGTGATATGAATCATATTATCACATCATTCATTCAGCTTGTGACGCGGTTGGAAGAAAGCTCTAAGTTTGTGAATGACAGAGATGCATTACTGAAGTTAGGGGAAAATGACTCACAATCATTGTTCAGCTCAACTTCCTCAAAGTATAAAAAGAATAAATTGGTGACTGAGAGGAAGTATAAGAGTAATGGAACACGTGGTAGTTTAGATAATGGAGAATATGCCTCTGATCGAGAAATTAGGAGGCGTTTATCAAAGTTGAATAAGAAATATTTTGACTCAGAAGGTGAAACATCTGATGACCTTGATGTTTCTTCTGAAGATGGCAAGAGTGACAATGAGTCTACAACCTCTGACAGTGAAAGTGACCATGAAATCTATTCAGAAAGTCGAATTGGGGAGTCAAGAGGAGATGGACACTTCGCACCTGATGAAGGTTTGGATTTCATAACTGATGATCGTGAATGGGGTGCTCGAATGACGAAAGCAAGTCTGGTTCCTCCTGTTACTCGGAAATATGAAGTCATTGACCAATATGTCATTGTAGCTGATGAGGAGGATGTGCAGAGGAAGATGCGGGTTTCATTACCTGATGACTATGCTGAAAAACTGAATGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAATTGCCTGAAGTCAAGGATTACAAACCAAGAAAACAGCTTGGTGATCAAGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACGCACAATCTATTACTTGATTCTATGCCAGAGGAATTAGATTGGCCTTTACAGGAGAAGCATTTGTTTATAGAAGACATGCTCCTTCGAATGTTGAACAAGCAAGTTAGGCATTTTACTGGAACTGGATCCACTCCAATGAGCTACCCTTTGCAACCGGTTATTGAAGAAATTAAAAGGTGTGCTGAGGAGGACTGTGATGCAAGGATGGTTAGAATGTGTCAGGGTATCCTAAAGGCCATAGAAAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGCCTTGGTGTTGTTTGCAACAAAGAAGAAGGATTCGGTGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTCGAGAAACAAGATGGTATACGTTCTCTGCAGAAAAATAGCAAAGATCCAGCTCCAGAATTCTATAATATTTACCTTGAGCGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAATTATGCCAGTCGAATATGTCATTCATGCAGACCTAATTGTGAAGCAAAAGTTACAGCTGTTGATGGTCATTATCAAATTGGCATTTATACTGTTCGAAACATACAACATGGTGAGGAGATCACTTTCGATTATAATTCTGTCACAGAGAGCAAAGAGGAATATGAGGCGTCAGTGTGTTTGTGTGGAAGCCAAGTTTGTCGGGGGAGCTATTTGAATCTGACTGGTGAAGGTGCTTTCCAGAAGGTGCTGAAGGAGAGGCATGGAATTCTTAATCGTCATTGTTTGATGCTAGAAGCTTGTGAATTAAACTCCGTCTCTGATGAGGATTATAATGATCTGGCAAGAGCTGGTTTAGGGAGTTGTTTGCTTGGTGGCCTGCCAGACTGGCTAGTTGCATATGCAGCTCGTCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTTTAAGGCATAATCTGGAAGAGAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTAGAGAGGAGTGATGCGGAGGTTCAGGCTGAGGGTGTATACAACCAAAGGCTGCAGAATCTCGCTGTCACTTTGGATAAGGTAAGGTATGTTATAAGATGTATTTTTGGTGATCCAAGGAAAGCGCCCCCTCCGCTTGAAAAGCTCAGCCCTGAAGCAGCTGTTTCCTTCCTCTGGAAAGGAGAGGATTCATTTGTTGAAGAGCTTCTTCAGAGCATGGCTCCTCATGTTGAAGAAGATATATTGAATGATCTTAAGTCCAAAATTCACTCTCATGATCCTTCTTCTGGTTCTGGAGATATTCAAAAAGAGCTTCAGAAATCTCTATTATGGTTGAGGGACGAAGTCAGAAATCTTTCTTGTACATACAAATGTCGGCATGATGCTGCTGCTGACTTAATTCATATTTATGCTTATACCAATTGCTTCTTTAGAATACGGGATTATCAAACTATTACTTCTCCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTGACAAGTTGGGAACAGGATTTCAGGAGTATCGGAAGACATATGGTGAAAATTATTGTTTAGGGCAGCTAATTTTTTGGCATAATCAGAGTAATGTGGATCCAGATAATAGCCTGGCCAGAGCCCGCAGGGGTTGCTTGTCATTGCCAGATGTAGGTTCCTTTTATGCCAAGGCTCAGAAGCCATCACGACATCGTGTTTATGGTCCTAGGACTGTCAGATCCATGCTGGCAAGAATGGAGAAGCAGCCCCAGAGACCCTGGCCCAAAGACAGGATATGGTCATTCAAAACTTCTCCAAAATTTTTTGGCAGCCCAATGCTAGATTCTGTTATAAATAATATTCCACTGGACAGGGAAATGGTTCAGTGGTTGAAGCACAGAACTGCCATATTCCATGCCATGTGGGACAGGTGA	7212	0.4268	MGDGGVACMPLHQQEHIMERLPNAEKTLCGGKNGNGFNSKLLKFADSERKKKMKVKKEEPAKKVQVERSQFVSERVDQSNDEVENDETYVEKVQKEEMEEGELGTMKWSKNDLENGEFVPEKPRRGEIENGEIVTEKWKKGELEKGEIVYGKGRREDVEKGEIVPERGRKGEVEKGEYGSWRGIKDDIEKGEFIPDRWHRGEVGKDDHGYSRLRRYQSGRDKGWKNERERTPPSGRYSGDDYIRKKEFNRNGSQHAKSAPRWESGQERNVRISSKIVDEEKNEHSNGRNHARDYSVGSRLKRHGNDSDSSERKHYGDYAGLKSRRLADDSCRPLYTEHYSRRSVERSYRNSSSKLSADKYSRNHESSLPTRPAYDRHGRSPGHSERSPRDRTRYYDHRDRTPVRRDRSPLGRDRSPYIREKSPHGRDRSPYIREKSPHGREKSPYERIWDRSRYNDHKIRSPTHVAERSPQDRRRHHDQRDQTPNLVEQPPIDRPRQNSHKETSSKTISSEKHNSPHSCKDDEDKHIHNEPSCSGTESHSDRSLHDVNGSIVKDKYEKTEKEPLSCSPSVSCRESPHFEPPPEELPSMEEDMDICDTPPHVPVVADSSSGKWFYLDYSGVEHGPSKLCDIKILVNEGILMSDHFVKHLDSDRWLTAENAASPLAAHSLPSIVSDSITQLVSPPEAPGNLLADPGDILQSGPENFQEMPTPLLQQMVCSNDTLFTSEPLEEFHIDERVGVLLEGYEVIPGRELEAIKEALQINFEYANWEGFRDYEGFPWHDGCLNEERDSRTDFASRDSEAQLSMLFDKDNGFAFGDPVDWFSARWSCKGGDWKRNDDVQDRSSRKKLVLNDGFPLCEMPKSGCEDPRWPRKDDLYYPSQSRRLDLPLWAFCADERVDSGTVSRSVQSKPFFVRGVKGNALPVVRINACVVKDQGSLVSETRHKIRGKDRHHSRSTRPFSSTSDSKRSSTEEDSQSKAVSDQGSCLSMEFVTTPKDRLCTVHDLQLHWGDWYYLDGSGRERGPSSFSELQVLVDRGIIKKYSSVFRKCDKLWVPVTSAADTSDASLGSHLESSSTGGKCSGLPLLQTHAVLFSETNNNTSLFNSIHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKENEKQLYWKSEGEARAAKRARILVDDSEWDSDIEDGSLTLQKNESTFDDLCGDATFNGEESGITLSEVGSWGLLDGHTLARVFHYLRSDLKSLVFASLTCKHWRAAILFCKSVSRQVNLSSLGHSCTDSMLWSIMNDYEKDKISSMILIGCTSITADMLEKILLSFPLLSTIDIRGCSQFNELTPKFTNVKWIKSRSSCLTKTAEEPHRIRSLKQITEQTSSVSKTSSLGTMDDFGELKDYFDSVDKRDTAKQLFRRNLYKRSKLYDARRSSSILSRDARTRRWAIKKSENGYKKMEEFLVSSLREIMKANSCDFFVPKVAEIEAKMKTGYYSGRGLSSVKEDISRMCRDAIKAKNRGDVGDMNHIITSFIQLVTRLEESSKFVNDRDALLKLGENDSQSLFSSTSSKYKKNKLVTERKYKSNGTRGSLDNGEYASDREIRRRLSKLNKKYFDSEGETSDDLDVSSEDGKSDNESTTSDSESDHEIYSESRIGESRGDGHFAPDEGLDFITDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVQRKMRVSLPDDYAEKLNAQKNGTEESDMELPEVKDYKPRKQLGDQVIEQEVYGIDPYTHNLLLDSMPEELDWPLQEKHLFIEDMLLRMLNKQVRHFTGTGSTPMSYPLQPVIEEIKRCAEEDCDARMVRMCQGILKAIESRPDDKYVAYRKGLGVVCNKEEGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRNIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKERHGILNRHCLMLEACELNSVSDEDYNDLARAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILRHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVIRCIFGDPRKAPPPLEKLSPEAAVSFLWKGEDSFVEELLQSMAPHVEEDILNDLKSKIHSHDPSSGSGDIQKELQKSLLWLRDEVRNLSCTYKCRHDAAADLIHIYAYTNCFFRIRDYQTITSPPVYISPLDLGPKYTDKLGTGFQEYRKTYGENYCLGQLIFWHNQSNVDPDNSLARARRGCLSLPDVGSFYAKAQKPSRHRVYGPRTVRSMLARMEKQPQRPWPKDRIWSFKTSPKFFGSPMLDSVINNIPLDREMVQWLKHRTAIFHAMWDR	2403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere08g0798	2403	PANTHER	HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3	434	2403	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	539	562	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	494	532	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	196	586	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	940	980	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	1603	1655	-	-
	Dere08g0798	2403	CDD	SET_SETD2-like	1846	1994	-	-
	Dere08g0798	2403	Pfam	Protein SET DOMAIN GROUP 2 C-terminal	1983	2403	IPR045606	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	358	483	-	-
	Dere08g0798	2403	Gene3D	SET domain	1798	2005	IPR046341	-
	Dere08g0798	2403	SMART	set_7	1838	1978	IPR001214	GO:0005515
	Dere08g0798	2403	SUPERFAMILY	F-box domain	1215	1269	IPR036047	GO:0005515
	Dere08g0798	2403	Pfam	SET domain	1917	1972	IPR001214	GO:0005515
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	196	252	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	70	127	-	-
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	272	348	-	-
	Dere08g0798	2403	ProSiteProfiles	SET domain profile.	1833	1972	IPR001214	GO:0005515
	Dere08g0798	2403	MobiDBLite	consensus disorder prediction	85	107	-	-
	Dere08g0798	2403	SUPERFAMILY	SET domain	1847	1995	IPR046341	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere08g0798	Dere-ChrDere08	11742740	11757810	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	SET	Dere08g0798		SET	7.7e-12	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere08g0798	08	11742740	11757810	Dere08g0798	08	11742740	11757810	ECH