Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0793 ATGGAGCTCGAGTGTGAGACTATTGTAAGTCGGCAGCATCGGCAATGTCGAAATTTTAGAATCGCGGCAATCCTTGCAGCCTTCGAATATTACAATACTGAGTACGCTGAGATTGTTGAAGATAACGACGACGGATGTAACAGAGGTATCTTGGGAGTCAACGCTCCTGGCTCCATCCCTGAAAACAGGAGTGCAACCTGCATGCACGAATTAGAGAAAACCCATACTAAAGGGGATGGATCCAAGTCCCTTGCCGAGACTCTGGCAAGATGGAAAGAATATAATGCCCGGCTTGATTCTTGCAATGATGCAGATAAGCCAATTCGGAAAGTTCCTGCCAAAGGATCCAAGAAGGGATGTATGAAAGGTAAGGGAGGGCCTGAGAACTCACGTTGTAACTACAGAGGTGTAAGGCAAAGGACATGGGGCAAGTGGGTCGCTGAAATTCGGGAGCCAAACAGGGGAAGTAGGCTCTGGTTGGGTACATTTCCTACAGCCATTGGAGCTGCTCTTGCCTATGATGAAGCAGCAAGAGCAATGTATGGTTCTAATGCCCGCCTCAACTTTCCCAATGTTTCAGTTTCCAATTTTTCGAATGAATCTTCTAGAGGTTCCCCAGCCGCAAATCAATCTGATTCTGCAGTGCCAACATCTGCACTTACTGAGTCTCTGATATCCGCAAGCAACTCCGAGTTTGGTGCAGTTGAGAATACTGAGAAGAAATTTGTTCCCTCAAATGTAAAAGTGGAGGAAGGGGAAGTTGAATCAAGGATCAGTTCCGCCACACTTTCACCCTCATGA 801 0.4682 MELECETIVSRQHRQCRNFRIAAILAAFEYYNTEYAEIVEDNDDGCNRGILGVNAPGSIPENRSATCMHELEKTHTKGDGSKSLAETLARWKEYNARLDSCNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSNARLNFPNVSVSNFSNESSRGSPAANQSDSAVPTSALTESLISASNSEFGAVENTEKKFVPSNVKVEEGEVESRISSATLSPS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0793 266 Gene3D AP2/ERF domain 133 192 IPR036955 GO:0003700|GO:0006355
Dere08g0793 266 SMART rav1_2 133 196 IPR001471 GO:0003700|GO:0006355
Dere08g0793 266 Pfam AP2 domain 132 182 IPR001471 GO:0003700|GO:0006355
Dere08g0793 266 SUPERFAMILY DNA-binding domain 133 190 IPR016177 GO:0003677
Dere08g0793 266 ProSiteProfiles AP2/ERF domain profile. 133 190 IPR001471 GO:0003700|GO:0006355
Dere08g0793 266 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Dere08g0793 266 PRINTS Ethylene responsive element binding protein signature 156 172 IPR001471 GO:0003700|GO:0006355
Dere08g0793 266 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 69 231 - -
Dere08g0793 266 MobiDBLite consensus disorder prediction 196 220 - -
Dere08g0793 266 FunFam Ethylene-responsive transcription factor 2 132 191 - -
Dere08g0793 266 CDD AP2 132 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0793 Dere-ChrDere08 11648332 11651702 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0793 70 194 AP2-EREBP Transcription Factor Family AT2G40350 59.690 3.39e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere08g0793 AP2 3.4e-14 CL0081