Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0782 ATGAAGAACTGTGAGCTGTGCAAGGTGCCGGCGAGGACCTACTGCGAGTCTGATCAGGCAAGTTTGTGTTGGGACTGCGACGCTAAGGTCCACGAAGCCAATTTCTTAGTAGCCAGGCATTCCAGGACTCTTTTGTGTCATACTTGTCAGTCTTTGACTCCATGGAAAGCCTCCGGTGTTAAGCTGGGAAATACTATTTCTCTTTGCTGTAATTGCACTGGTGGAATGAAGGGTATGGATGAAGATAGAGAAGAGAGTGAAGGTGGCAATGATAACGATATAGATACAGAGGATTATTACGATGACGATGATTGCAGCAGTGACGATGATGATGACGACGCAGGCGGTGGCGGCGACGGTGAGGTTGGCGGTGACGAGGATGGAGATAATCAGGTAGTTCCCTTGTCCTCCATACCGCCTCCGCCGGTTTCAAACTCTTCGAGTAGCGAAGGGTCGATTAGCAGGTGTAACAGCAGCAACAGATGTATCTCTGAAACCGTAAACACAATATCGTTGAAACGGAAGCGTGAGGATGCATCGCATCGAAATTTCCAGAATACTTGGAAGCGTTCGTGTAATAAACATATGGATGGTGCGGAGTCTAGAAAGCAGGTGGTTTTGTTAGAGTGTGAACGTGGCGAAGGAACATCGATCCAGCCGCTGATGTCATTAAAAAACACAGATGACTGTAAAACACCGAAAGCCGTTTAA 711 0.4754 MKNCELCKVPARTYCESDQASLCWDCDAKVHEANFLVARHSRTLLCHTCQSLTPWKASGVKLGNTISLCCNCTGGMKGMDEDREESEGGNDNDIDTEDYYDDDDCSSDDDDDDAGGGGDGEVGGDEDGDNQVVPLSSIPPPPVSNSSSSEGSISRCNSSNRCISETVNTISLKRKREDASHRNFQNTWKRSCNKHMDGAESRKQVVLLECERGEGTSIQPLMSLKNTDDCKTPKAV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0782 236 MobiDBLite consensus disorder prediction 80 157 - -
Dere08g0782 236 MobiDBLite consensus disorder prediction 85 126 - -
Dere08g0782 236 MobiDBLite consensus disorder prediction 142 157 - -
Dere08g0782 236 CDD Bbox1_BBX-like 4 45 - -
Dere08g0782 236 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Dere08g0782 236 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 205 - -
Dere08g0782 236 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Dere08g0782 236 SMART bboxneu5 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0782 Dere-ChrDere08 11583221 11584085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0782 2 112 C2C2-CO-like Transcription Factor Family AT4G27310 50.450 6.50e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere08g0782 zf-B_box 2.2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0782 08 11583221 11584085 Dere07g0467 07 7627054 7627680 CCT
Dere08g0782 08 11583221 11584085 Dere08g0782 08 11583221 11584085 ECH