Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0776 ATGGACAACATGAAGAAACCACGGTTCTGGATTTCAGTTCTCATGCTCTGCTTCTCTTTTCACGCCCACCTTTCTCTTGGAGCTTTCACCGCCATCACTGCAAGTCAATCTCTTTCTGGCGATCAAACTCTTATATCTGAAGGCGGGGTCTTTGAATTGGGATTCTTCAGTCCAGGTAATACCTCTACTTCTAAATTCTACATAGGCATCTGGTACAAGAAGGTCTCTGAACGGACCGTTGTTTGGGTAGCTAACAGAAATAAACCTGTCTCTGACAAAAATTCGGCCAAGTTAGCAATGTCGGGTGGTAATTTAGTTCTTTTGGACGAGTCTCAAAAGCCCATTTGGTCAACAAACTTGACTTCTCCCACCTCGAGTGTTGTGGAAGCTGTCCTTCAAGATAGTGGGAATCTAGTTTTAAGAGATAGGCCTAATGCAACACAGTTCCTATGGCAGAGCTTTGATAATCCAACTAACACATGGCTTCCGGGTGGTAAAATTAGATTAGACAATAAAACAAAACAGCCCCAATATCTCACTTCATGGAAGAATAGCGAGGACCCTGCAGAAGGCCTTTTCTCTCTAGAACTAGACCCCAAAGGAACCACTTCCTATTTAATTCTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGTCCTTGGAATGGACAGATTTTCGGCTTGGTTCCTGAAATGAGGTTAAATTTTATGTACAATTTCACATTTGTGTCAAACGAGAATGAGAGCTATTTCACATATTCTATGTATAATAGTAGTATCATATCTCGATTCGTGATGGATATCTCGGGGCAGATCAAGCAGCTGTCATGGTTGGAAACTAGCAAGCAATGGAACTTGTTCTGGTCACAGCCAAGACGACAATGTGAGGTTTATGCATATTGTGGTGCATTTGGAATATGCACTGAGAATTCCATGCCATTCTGTACGTGTTTGCCTGGCTTTGAGGCGAAGTTACAGACTGACTGGAATCTGAACGATTACTCTGGTGGGTGTGTGAGGAAAACAAAGTTGCAATGTGAGAACTCTAATTCTTCTAAGGGAAAAAAGGACAATTTCCGACCAGTGACCAACATTGCATTACCTAACCATGCCCAATCTGTTGGAGCAGGGAATGCAGGGGAATGTGCATCAGCCTGCTTGAACAATTGCTCCTGCGCCGCTTATGCATATGATAGTAAAGGGTGTTCAATTTGGCCCAGTGATCTCTTAAATGTGCAACAACTTTCCCAAGATGATAGCAGTGGAGAAACTCTATATCTCAAGCTTGCAGCTTCTGAGTTTCCTGATTCTAAAAAAAGTAAGGGGGTGATTATTGGTATTGTTGCTGGCTCGGTGGGGGGTATGGGGGTTCTCCTAGCCATTCTTCTATTTGTGATGCTTAGGCGAAGAAAGAGAATTATTGGAGCAGGAAAATCGGTGGAGGGTTCATTGATGGCATTTGGGTACAGAGACTTGCAAAATGCGACAAAGAATTTCTCAGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTGTTCAAAGGAACATTGCCAGATTCCAGTGTCATAGCAGTGAAGAAGCTTGAAAGCATTAGCCAGGGCGAGAAGCAGTTCCGGACAGAAGTCAGTACAATTGGGACAGTCCAACATGTTAATCTTGTTCGGCTTAGAGGGTTCTGTTCTGAAGGAGCCAGAAAACTGCTGGTCTATGATTACATGCCAAACAGTTCTTTGGATTCTCATCTGTTTCAGGAAAAGAATTCTAAGGTATTGGACTGGAAAATGAGGTACCAAATTGCTCTTGGAACAGCTAGGGGGTTAACTTATCTGCACGAGAAGTGCAGAGACTGTATCATACACTGTGATATCAAGCCAGAAAACATTCTCCTGGATGCTGATTTTTGTCCAAAAGTAGCCGACTTTGGACTCGCGAAGCTAGTGGGACGAGATTTCAGTAGGGTTCTGACAACCATGAGAGGAACTAGAGGTTATCTTGCTCCAGAGTGGATTTCTGGGGTAGCTATTACGGCCAAAGCTGATGTTTACAGCTACGGGATGATGCTTTTCGAATTTGTATCAGGTAGGAGGAACTCTGTGCCATCTGAAGATGGCCGAGTTAAGTTCTTTCCCACTTGGGCTGCAAATGTAGTAACCCAAGGAGGCAATGTGCTTAGCCTTTTAGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTGACTCGAATAGTAAAAGTTGCTTCCTGGTGTGTCCAAGATGATGAAACTCACAGGCCATCCATGGGTCAGGTAGTTCAGATACTTGAGGGGGTCTTGGATGTTAATTTGCCTCCAATTCCAAGGTCCCTCCAATTGTTTGTTGAAGACCAGGAGAACATAGTTTTCTTCACTGACTCAAACTCAAGCTCGAACCAGAGCTCACAGGTCAGGAGCAACGTTTCAACAGCCTCCTCTCAAGCGTAA 2460 0.4382 MDNMKKPRFWISVLMLCFSFHAHLSLGAFTAITASQSLSGDQTLISEGGVFELGFFSPGNTSTSKFYIGIWYKKVSERTVVWVANRNKPVSDKNSAKLAMSGGNLVLLDESQKPIWSTNLTSPTSSVVEAVLQDSGNLVLRDRPNATQFLWQSFDNPTNTWLPGGKIRLDNKTKQPQYLTSWKNSEDPAEGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGQIFGLVPEMRLNFMYNFTFVSNENESYFTYSMYNSSIISRFVMDISGQIKQLSWLETSKQWNLFWSQPRRQCEVYAYCGAFGICTENSMPFCTCLPGFEAKLQTDWNLNDYSGGCVRKTKLQCENSNSSKGKKDNFRPVTNIALPNHAQSVGAGNAGECASACLNNCSCAAYAYDSKGCSIWPSDLLNVQQLSQDDSSGETLYLKLAASEFPDSKKSKGVIIGIVAGSVGGMGVLLAILLFVMLRRRKRIIGAGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGARKLLVYDYMPNSSLDSHLFQEKNSKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSVPSEDGRVKFFPTWAANVVTQGGNVLSLLDPRLEGNADIEEVTRIVKVASWCVQDDETHRPSMGQVVQILEGVLDVNLPPIPRSLQLFVEDQENIVFFTDSNSSSNQSSQVRSNVSTASSQA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0776 819 PIRSF SRK 3 818 IPR024171 GO:0004674
Dere08g0776 819 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Dere08g0776 819 ProSiteProfiles Bulb-type lectin domain profile. 29 153 IPR001480 -
Dere08g0776 819 SMART ntp_6 354 429 IPR003609 -
Dere08g0776 819 SUPERFAMILY Hairpin loop containing domain-like 356 418 - -
Dere08g0776 819 SMART serkin_6 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0776 819 PANTHER OS07G0415500 PROTEIN 13 779 - -
Dere08g0776 819 FunFam Serine/threonine-protein kinase 572 775 - -
Dere08g0776 819 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Dere08g0776 819 Pfam D-mannose binding lectin 79 183 IPR001480 -
Dere08g0776 819 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Dere08g0776 819 CDD B_lectin 35 157 IPR001480 -
Dere08g0776 819 Pfam Protein kinase domain 500 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0776 819 CDD STKc_IRAK 503 769 - -
Dere08g0776 819 SMART blect_4 35 157 IPR001480 -
Dere08g0776 819 Gene3D - 28 154 IPR036426 -
Dere08g0776 819 Pfam PAN-like domain 354 412 IPR003609 -
Dere08g0776 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 222 IPR036426 -
Dere08g0776 819 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0776 819 MobiDBLite consensus disorder prediction 797 819 - -
Dere08g0776 819 CDD PAN_AP_plant 342 430 - -
Dere08g0776 819 ProSitePatterns Protein kinases ATP-binding region signature. 503 526 IPR017441 GO:0005524
Dere08g0776 819 Gene3D Phosphorylase Kinase; domain 1 465 571 - -
Dere08g0776 819 FunFam Serine/threonine-protein kinase 464 571 - -
Dere08g0776 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Dere08g0776 819 FunFam Serine/threonine-protein kinase 25 154 - -
Dere08g0776 819 SUPERFAMILY Protein kinase-like (PK-like) 482 804 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0776 Dere-ChrDere08 11528558 11531017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0776 478 777 Receptor kinase-like Gene Family AT5G20050 44.937 1.43e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere08g0776 Pkinase 1.2e-46 CL0016