Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0773 ATGGTGAGAACGCCTTCGTTTGACAAAACTGGACTGAAAAAAGGAACCTGGACACCCGAGGAAGACAGGAAGCTAATCGCCTATGTTACCAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGACTGGCAAGGTGTGGAAAAAGTTGTAGACTAAGGTGGATGAATTATCTGAGACCCAACATCAAGAGAGGGAACTACACTCGTGAAGAAGAAGAGATCATTATCAAGATGCACAAAAAGCTTGGCAATAGATGGTCCGCGATCGCAGCTCATTTACCAGGAAGAACAGATAACGAAATAAAGAACCACTGGCACACCACCCTCAAGAGGCGCCTTGAACTCGATTCATCATCACTCCCCAATGAAATGGCCAACGCTAAGCTCTCAAAAAAGTCAAAGGACACCTCCACACCACACAGTGGTCCTTCTCAGTCATCTTCTACTCCAAAAGCTGCTTCTTCCCATGTTGAAATCCTCGATTCCAGCTCTAGCCCAATGTCTCCCCAGTCATCATCTAGTTGCATAACCACTTCTGCTACTGCTACTGCTACTGCTCACCAAAATTCAAATCTGGAAAGTGACTTGGCTTTTCTGGATGCTTGCACAGAGCCTGAGACCCAAAATTTCTGGACCGACCTAAATATGGATGACCTCTTTTACGACCCAATTGAAACAATGCCAATCCATGCTACTTCTCACACTCCACCTATTCTTCACACCTGTGCCTCGTCTTCCGACCCATCCTCCACACTAAGTAATTTGGTTGTGGAGGATGGATTTGCCCTTCTAGATTCACTTTCAGAGGTAGCAATGGAAAAGTTTCTGACAGAGGCACATATGGCTGACATGTCTTACCTTCCAACAGAGTCACAATTACCATTGGCCACTGAATTAGAATATCATGATCCACTGTACGATTTAGATCTTTGGAGTCATCAGAGCAGTTTGCATATATGA 969 0.4541 MVRTPSFDKTGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTREEEEIIIKMHKKLGNRWSAIAAHLPGRTDNEIKNHWHTTLKRRLELDSSSLPNEMANAKLSKKSKDTSTPHSGPSQSSSTPKAASSHVEILDSSSSPMSPQSSSSCITTSATATATAHQNSNLESDLAFLDACTEPETQNFWTDLNMDDLFYDPIETMPIHATSHTPPILHTCASSSDPSSTLSNLVVEDGFALLDSLSEVAMEKFLTEAHMADMSYLPTESQLPLATELEYHDPLYDLDLWSHQSSLHI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0773 322 CDD SANT 69 112 IPR001005 -
Dere08g0773 322 CDD SANT 16 61 IPR001005 -
Dere08g0773 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Dere08g0773 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Dere08g0773 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Dere08g0773 322 Gene3D - 6 67 - -
Dere08g0773 322 MobiDBLite consensus disorder prediction 130 179 - -
Dere08g0773 322 Gene3D - 69 144 - -
Dere08g0773 322 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Dere08g0773 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Dere08g0773 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 211 - -
Dere08g0773 322 MobiDBLite consensus disorder prediction 139 179 - -
Dere08g0773 322 FunFam MYB-related transcription factor 13 66 - -
Dere08g0773 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere08g0773 322 SMART sant 66 114 IPR001005 -
Dere08g0773 322 SMART sant 13 63 IPR001005 -
Dere08g0773 322 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0773 Dere-ChrDere08 11474155 11475320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0773 1 194 MYB Transcription Factor Family AT2G31180 47.980 7.92e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere08g0773 Myb_DNA-binding 2.1e-12 CL0123