Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0771 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAACTACCATGCCCTTCCCTCTGACGCTGTCTCTTCCCTCTTCCTCACTGAATCTGACCACATCCCTTCCCAAAATTACTTTCACAGTCTCAAAGCCAGAGATTTTGACATCTCTCTCAGAACACAAGTCATTTCTCTCATCTCCCAGTTGCCCTGTACCTTCGATCCCCTCCTAGCCTACCTAGCTATCAATTATCTGGATCGGTTTCTGGCCAACCAAGGCACACTGCAACAAAAGCCATGGACCCTCAAGCTCCTTGCCATATCTTGCTTATCTCTAGCTGCAAAGATGATGAAAACAGAGTTTTCCATTACTGATGTCCAGGGTGACGGTGGCATCATTTTCGAAACCCAAACAATACAACGAATGGAAGCCCTAATATTGGGAGCTCTACAATGGCGAATGCGCTCCATCACCCCCTTCTCTTTCATTCCTTTCTTCATCACTTTCTTCAGGCTCAAAGACCCCCCATTGAGGCAAGTTCTGAAAGATCGAGCTGCCCAAATTATATTCAAATCACAAAGAGAGATAAAGCTTTTGGAATTCAAGCCTTCCATAATTGCTGCATCGGCCCTTTTGTATGCTTCTCATGAGCTGTTTCCCTTCCAATATCCGTGCTTTCTAGCTGCAATATCGGATTGTCCATTTGTAAATAAAGAAACAATGTTGCAGTGCTACAATGTGATACAAGACATAGCAATGGAGGGGTACGAGTCAGTGTTAGACATGGTTTCAAGTTCGGACACACCGGTTAACGTCTTGGACCATCATTTTCTGAGCTCAGAAAGTGAAAGAACCGACGGAAATCCCGCTGCTGCCACTACACTCAGGCAAGAGAAGGATCTAAAAAGAAGGAAAATCACCGATTATGGAGGCAATCATACGGTCCAGATTTCTCAGGTTTAA 936 0.4455 MEFDLENPLENYHALPSDAVSSLFLTESDHIPSQNYFHSLKARDFDISLRTQVISLISQLPCTFDPLLAYLAINYLDRFLANQGTLQQKPWTLKLLAISCLSLAAKMMKTEFSITDVQGDGGIIFETQTIQRMEALILGALQWRMRSITPFSFIPFFITFFRLKDPPLRQVLKDRAAQIIFKSQREIKLLEFKPSIIAASALLYASHELFPFQYPCFLAAISDCPFVNKETMLQCYNVIQDIAMEGYESVLDMVSSSDTPVNVLDHHFLSSESERTDGNPAAATTLRQEKDLKRRKITDYGGNHTVQISQV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0771 311 FunFam D6-type cyclin 33 142 - -
Dere08g0771 311 PANTHER CYCLINS 32 243 IPR039361 -
Dere08g0771 311 SMART cyclin_7 51 139 IPR013763 -
Dere08g0771 311 SMART cyclin_7 152 241 IPR013763 -
Dere08g0771 311 SMART Cyclin_C_2 148 263 IPR004367 -
Dere08g0771 311 FunFam D6-type cyclin 143 237 - -
Dere08g0771 311 SUPERFAMILY Cyclin-like 16 145 IPR036915 -
Dere08g0771 311 Gene3D - 22 236 - -
Dere08g0771 311 Pfam Cyclin, C-terminal domain 148 243 IPR004367 -
Dere08g0771 311 CDD CYCLIN_AtCycD-like_rpt2 148 239 - -
Dere08g0771 311 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Dere08g0771 311 Gene3D - 33 146 - -
Dere08g0771 311 SUPERFAMILY Cyclin-like 130 244 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0771 Dere-ChrDere08 11449156 11450799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0771 1 294 Core Cell Cycle Gene Families AT4G03270 46.154 4.21e-84 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0771 08 11449156 11450799 Dere08g0771 08 11449156 11450799 ECH