Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0739 ATGGGTGGGAAGAGATATGCTTTAGAGTACATGGGAGTGAAGATCTATGGACAAGTTGTATTGGGATATATTTTGATTTGCACGGTTCAGATTTTGCGTGGAGACACTAATCCCACTGATGTTGCGGCTATCAATGGCTTGCATGCTGCTCTGGGCTACCCTGTTCTCCCGGGGTGGGTTCCTAGTGGGGGAGATCCATGTGGACAGGCATGGCAAGGCGTTCAATGTAATGGCTCAGTCATACAGAGCATAGTTTTGAATGGTGCAAATTTGGGAGGAGAATTGGGTGATAGCTTGGGAACATTTGTTTCCATCAGTGCAATAGATCTAAGCAACAACCATATTGGGGGAACTATACCATCCAATTTGCCGGTGACCATGCGAAACTTTTTTCTTTCAGATAACCAGTTCACTGGAAGTATTCCAGCTTCTTTATCCACGTTGACTGAACTGACAGACATGTCTCTTAATGACAATCATTTAACTGGAGAAATACCGGATGCCTTTCAATCACTTACACAACTGATCAATCTAGATCTATCTAGTAATAACCTGAGTGGGGAATTGCCTCTGTCTCTAGAGAACTTGTCTACTATGACCACCTTACGCTTACAGAACAATCAGCTATCTGGGACCCTTGATGTTTTACAAAATCTTCCACTGAAAGATTTGAATGTAGAGAACAACCAGTTCGCTGGACCAATACCTCAAAAGTTGCAAGGCATCCCAAACTTCAGAAAAGATGGAAACCCATTCAATCTTAATGCTACTATAGCTCCAGCTCCTTCATCTCATGCTCCAGTGACAGCACCACCAGGAACACTGGTTTCTGGTACACCATCTTCTGGACACATACCTACTAATCAGGCTGATGGACCTACTGCTACAATGGAATCAAATTCTGAAAAATCAAAAAAAACCACCAAAAGGGTGGTTTGGATATCTGTTGCTGGTGTATTACTATTTATCATTTTGGTTCTGGGACTTGCTCTCTTTATACCAAAATGTGGCAGAAGGGAAAAGGTTGACAAAATTTCCAAGGAACATAAAATTGGTGCATATGGAGGAGACAAACAGAATTCTGGCGATTACAGGGCTTTAGTCCAACCACCTGTTCAAACTGAGAAAGTACCGAAAGGGGCTGTTCTGAGACCAAAAGATCATCAAGCAGAGACAAAGAGAGTGGCGGCTATTCAAAAGTCACAGGATGAGCAAGAGAAGGATGTGCTGAGAATGGGAACAATCCCAAAGCAGGGAGGTCATGAAATAGATATGAGTTCCCTAGACATATATTCAATGCCTCCTCCACCCCTACCCACACCACCTCCTCCTCCACCTTTTGCTGAGAGTGTGGTTGTCAAACCAATCACATTCCATCGAGGGGCTGCTGCCAAACCTTCTGCAAAACGTCTAGTTACTCCCACTTTTGCAAAATCTTTTACCATTGCATCTCTTCAGCAGCATACTAACAGCTTTTCTCAAGATAATCTTATTGGAGGAGGCATGCTGGGAAGTGTTTATAGGGCAGAGCTTCCTGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAGAAAGCCTCTGATCACCAAAAGGATGAGGAGTTTCTTGAATTGGTACACAATATTGATAGGATTCGACATGCAAATGTTGTTGAGCTTATTGGATACTGTGCAGAGCATGGTCAAAGGCTTTTAATCTATGAGTACTGCAGTAACGGGTCACTGCATGATGCACTCCATTCAGATGATGAATTCAAAACAAGACTGTCATGGAATGCTCGGATTCAGATAGCACTTGGGGCAGCTAGAGCTTTAGAGTATTTGCACGAGATCTGCCAGCCACCTGTTGTACACAGAAATTTTAAGTCTGCCAATATTCTTCTTGATGATGATCTGTCCGTGCATTTGTCTGATTGTGGTTTGGCTCCATTGGTAGCTTCAGGTTCAGTGAGTCAGCTCTCTGGGCACCTGCTCGCAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACACAACAGAGCGATGCTTACAGTTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGGCAATCCTATGACAGGACGCGTACCAGGGGAGAGCAGTTTCTAGTGAGGTGGGCGATTCCCCAACTTCATGACATCGATGCCTTATCAAGGATGGTTGACCCTTCTCTGAATGGAGATTACCCGGCCAAATCATTGTCAAACTTTGCAGACATCATTTCTCGATGTGTTCAGTCGGAGCCAGAATTTAGGCCACAAATGTCAGAGGTTGTCCAGTACTTGTTAGATATGATACGGAGGGAGTCTCGAAGTAATGGATCAAGAGAAGAATGA 2349 0.4389 MGGKRYALEYMGVKIYGQVVLGYILICTVQILRGDTNPTDVAAINGLHAALGYPVLPGWVPSGGDPCGQAWQGVQCNGSVIQSIVLNGANLGGELGDSLGTFVSISAIDLSNNHIGGTIPSNLPVTMRNFFLSDNQFTGSIPASLSTLTELTDMSLNDNHLTGEIPDAFQSLTQLINLDLSSNNLSGELPLSLENLSTMTTLRLQNNQLSGTLDVLQNLPLKDLNVENNQFAGPIPQKLQGIPNFRKDGNPFNLNATIAPAPSSHAPVTAPPGTLVSGTPSSGHIPTNQADGPTATMESNSEKSKKTTKRVVWISVAGVLLFIILVLGLALFIPKCGRREKVDKISKEHKIGAYGGDKQNSGDYRALVQPPVQTEKVPKGAVLRPKDHQAETKRVAAIQKSQDEQEKDVLRMGTIPKQGGHEIDMSSLDIYSMPPPPLPTPPPPPPFAESVVVKPITFHRGAAAKPSAKRLVTPTFAKSFTIASLQQHTNSFSQDNLIGGGMLGSVYRAELPDGKLLAVKKLDKKASDHQKDEEFLELVHNIDRIRHANVVELIGYCAEHGQRLLIYEYCSNGSLHDALHSDDEFKTRLSWNARIQIALGAARALEYLHEICQPPVVHRNFKSANILLDDDLSVHLSDCGLAPLVASGSVSQLSGHLLAAYGYGAPEFESGIYTQQSDAYSFGVVMLELLTGRQSYDRTRTRGEQFLVRWAIPQLHDIDALSRMVDPSLNGDYPAKSLSNFADIISRCVQSEPEFRPQMSEVVQYLLDMIRRESRSNGSREE 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0739 782 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 458 569 - -
Dere08g0739 782 SUPERFAMILY Protein kinase-like (PK-like) 471 766 IPR011009 -
Dere08g0739 782 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 774 IPR046959 -
Dere08g0739 782 MobiDBLite consensus disorder prediction 274 301 - -
Dere08g0739 782 Gene3D Phosphorylase Kinase; domain 1 458 569 - -
Dere08g0739 782 ProSiteProfiles Protein kinase domain profile. 492 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0739 782 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Dere08g0739 782 MobiDBLite consensus disorder prediction 263 304 - -
Dere08g0739 782 Pfam Protein tyrosine and serine/threonine kinase 495 766 IPR001245 GO:0004672|GO:0006468
Dere08g0739 782 Gene3D Transferase(Phosphotransferase) domain 1 570 781 - -
Dere08g0739 782 SUPERFAMILY L domain-like 38 244 - -
Dere08g0739 782 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 570 780 - -
Dere08g0739 782 Pfam Leucine rich repeat 128 185 IPR001611 GO:0005515
Dere08g0739 782 Gene3D Ribonuclease Inhibitor 41 259 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0739 Dere-ChrDere08 11175364 11182335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0739 36 778 Strubbelig Receptor Gene Family AT4G03390 62.272 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dere08g0739 PK_Tyr_Ser-Thr 1.7e-42 CL0016