Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0734 ATGGGGTGTTGTGTCTCAACAAGCAGTAGGAGTACTTGTAGTAGTAGAAGCAACGGAGACAGAGTCTCTCCATCTTGTTTCGATATTGGATTTTGTGGGCAGAAGAGAACTAGAACATTCTCTGATCAAGTTATTTCTCTGCAGCATCTACCATCTATCCCGAACAGAATTTTTATGAATGGAAAGAGCCAGACTTCTTGCATTTTTACGCAGCAGGGGCGAAAGGGTATCAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCAGAAGATGTGATCTTTTGTGGTGTCTTTGATGGCCATGGTCCTTATGGTCATCTTGTCGCACGCAAGGTGAGGGATGCCTTGCCAATCAAATTGCTTTCATTTTTGCACTCGTGTGAATCGAAACAAACTAGGTCGGGTAAAGCTTGCTTCAAGGGGAACATAAAGCCTGATGGTGGAGATTCCGAGAAGGATTGCTCTGCTGAAGATAAACTGGATTCTTTATGGCGAGAAGCTTTCTTGAAGGCATACAAGGCCATGGACAAAGAGCTGAAGTCTCATCCAAATTTGGATTGTTTCTGCAGTGGGAGCACGGCTGTCACTATAGTGAAGCAAGGTTCAAATCTGTTCATGGGCAACATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAACAATGATTCCATGGTGGCACTTCAGTTGACTGTTGACTTGAAGCCTGATTTGCCAAAGGAAGCAGAAAGGATTAAACGGTGTAAGGGTAGGGTTTTCGCTCTGCAAGATGAGCCAGAAGTGTCTAGGGTATGGTTGCCTTTTGATGATGCACCTGGATTAGCAATGGCTCGAGCATTTGGAGACTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGAAAGAGATCAGTTCATTGTTATTGCCTCAGATGGGGTCTGGGATGTCTTAAGCAATGAGGAAGTTGTTGAGATTGTATCTTCAGCTCCATCACGGTCATCAGCAGCACGGATTCTGGTGGATTCTGCAGCTCGAGAGTGGAAACTCAAATATCCAACTTCAAAGATGGATGACTGCGCTGTTGTTTGCCTATTTTTGGATGGAAAAATGGATGCAGAATCTGATTATGATGAACAAGGCTTCTCTTCTGCCACAATCCAGAGCAACCATTCAGGAAATCCAATTGAATCTGATGATGGGCAAAAGTCTGAGCCATCTCTGCAGAGGAACTTCACCGTAAGATCGTCAGATGAAAATGAGACATATGGTGGCCTAACTATTGATGTGGAAGATGGAACATCCACAGCCGAAGATCAGAACTGGTTAGGTTTGGAAGGTGTCACCCGAGTAAACTCGCTTGTCCAACTTCCTAGATTTTCTGAGGAAAGACCAAAACCTTGA 1410 0.4447 MGCCVSTSSRSTCSSRSNGDRVSPSCFDIGFCGQKRTRTFSDQVISLQHLPSIPNRIFMNGKSQTSCIFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPYGHLVARKVRDALPIKLLSFLHSCESKQTRSGKACFKGNIKPDGGDSEKDCSAEDKLDSLWREAFLKAYKAMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGNIGDSRAIMGSKDNNDSMVALQLTVDLKPDLPKEAERIKRCKGRVFALQDEPEVSRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTERDQFIVIASDGVWDVLSNEEVVEIVSSAPSRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDAESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSDENETYGGLTIDVEDGTSTAEDQNWLGLEGVTRVNSLVQLPRFSEERPKP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0734 469 SMART PP2C_4 49 367 IPR001932 -
Dere08g0734 469 MobiDBLite consensus disorder prediction 1 21 - -
Dere08g0734 469 Pfam Protein phosphatase 2C 135 346 IPR001932 -
Dere08g0734 469 Gene3D - 58 376 IPR036457 -
Dere08g0734 469 MobiDBLite consensus disorder prediction 379 437 - -
Dere08g0734 469 ProSiteProfiles PPM-type phosphatase domain profile. 65 369 IPR001932 -
Dere08g0734 469 MobiDBLite consensus disorder prediction 381 425 - -
Dere08g0734 469 FunFam probable protein phosphatase 2C 52 56 372 - -
Dere08g0734 469 CDD PP2Cc 71 369 IPR001932 -
Dere08g0734 469 PANTHER PROTEIN PHOSPHATASE 64 367 IPR015655 GO:0004722|GO:0006470
Dere08g0734 469 SUPERFAMILY PP2C-like 55 371 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0734 Dere-ChrDere08 11121893 11124630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0734 1 468 PP2C-type Phosphatase Gene Family AT1G03590 68.697 0.0 626