Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0730 ATGGAAGCCAAACAGTTGGAAGCAGTACTGAATAGCCAAGTAGATATTTGGAAGCTTCTTTTTGGTTTTGTGGACTCTATGGCTTTGAACTGTGCTGTGGAGCTTCGCATAGCTGACATAATACACTCTCATGGCCGCCCAATCCCCTTGTCTACTATAGCTGCCTCCTTGAACTCTCCCTCTCCCTCCACCTCCTACCTCGCTCGCATCATGAGGTTGCTCGTACGCAAGAACATCTTCACCGCCAAACCCGACGGCGGAGACACCCTCTACGGCCTGACGGAGGCCTCCACGTGGCTTCTTCACGGCACCCAGTTCAGCCTCGTTCCCATGATCACCATGGAAATCCATACCTGGCAGCTCGCCCCGTGGCATTACCTCAGCCAATGCGTCAGAGACGGTGGCAGCGCCTTCACCAAGGCTCATGGCTGCCACATTTGGGACTTCGCTTCTCAAAACCCTGAGTTCAACACTTTGTTCAATAATGCCATGCAAGGTGCAGTGAAGATCGTCGTGGAGGCTATGCTTTCTGAGTATAAGCATGGGTTCGCAAGCATAGGATCCCTTGTGGACGTGGGAGGTGGGACCGGAGGGTTCATAGCCGAGATCGTTAAATCCCATCCACACATCAAAGGCATCAACTTTGATCTGCCACATGCCATCGCCGCAGCCCAAGAGCACCAAGGAGTCACCCATATCAGCGGCAACATGTTTGACGCCATCCCATCTGCAGAGGCTGTTCTTCTTAAGTGGGTGCTGCATGATTGGAGTGATGAGGAGTGCATGAAGATACTGAAGAAGTGCAGGGAAGCAATTCCAGAAAAGAAGGGGAAGGTAATAATAGTGGAGATGGTGTTAGAGCCAGAGGGGAAAGGAGTACTGGATGATACAAGAATAGCATTTGATCTGCATATGATAGCTAATGCTACAGGAGGGAAAGAGAGAACCATATCCGAATGGAAGAAGCTACTAGAAGAAGCAGGCTTCTCTCGCTACAACTTCATCGCCATCCCGGCAATTCCATCCATCATTGAGGCTTACCCTAGTTGGAATTAA 1056 0.5057 MEAKQLEAVLNSQVDIWKLLFGFVDSMALNCAVELRIADIIHSHGRPIPLSTIAASLNSPSPSTSYLARIMRLLVRKNIFTAKPDGGDTLYGLTEASTWLLHGTQFSLVPMITMEIHTWQLAPWHYLSQCVRDGGSAFTKAHGCHIWDFASQNPEFNTLFNNAMQGAVKIVVEAMLSEYKHGFASIGSLVDVGGGTGGFIAEIVKSHPHIKGINFDLPHAIAAAQEHQGVTHISGNMFDAIPSAEAVLLKWVLHDWSDEECMKILKKCREAIPEKKGKVIIVEMVLEPEGKGVLDDTRIAFDLHMIANATGGKERTISEWKKLLEEAGFSRYNFIAIPAIPSIIEAYPSWN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0730 351 CDD AdoMet_MTases 189 283 - -
Dere08g0730 351 Gene3D Vaccinia Virus protein VP39 102 349 IPR029063 -
Dere08g0730 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 347 IPR029063 -
Dere08g0730 351 PANTHER O-METHYLTRANSFERASE 10 331 IPR016461 GO:0008168
Dere08g0730 351 PIRSF O-mtase 1 349 IPR016461 GO:0008168
Dere08g0730 351 Pfam O-methyltransferase domain 124 330 IPR001077 GO:0008171
Dere08g0730 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 348 IPR016461 GO:0008168
Dere08g0730 351 FunFam O-methyltransferase family protein 102 347 - -
Dere08g0730 351 Gene3D - 1 100 IPR036388 -
Dere08g0730 351 SUPERFAMILY "Winged helix" DNA-binding domain 7 103 IPR036390 -
Dere08g0730 351 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0730 Dere-ChrDere08 11091929 11093075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0730 27 329 Monolignol Biosynthesis Gene Families AT5G54160 37.621 2.33e-69 219