Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0728 ATGCCTCACTTATTTCTCTACTCCTGTGATTTGCATGAAATTCTGGTACTTATCGCCTTTTGCTTTCAGGGTCAGCACAAGGATGATAGAGTGGAGGAAGATGATGAACTGGTTGGGCAGGCTGAAATATGGAGGTACATGACTAGCTTCACCGATTCTGTTGCCCTCAAATGTGCTGTGGAGCTCCGCGTAGCTGACATTATTGATCAATATGGCCAACCCATCTCTCTCCAAAAGATTGTGGACAACATTGCTGACGCACCCACGCCTGAGATCTCCTTCCTCTATCGTATCATGCGAGTCCTGGTCCGCAGAAAGATCTTCTCCGCACAGCAATCTGAGTCCGGCGAGACCCTTTACGGCTTGACTCGTGCTTCCAAATGGCTCTTGCGAGACACTAAAATGACCCTCTCTCCCATGCTTCTCCTCGAGAACCACCCTCTGCATTTGAATCCCACTCACTACATCAGCGAATGTGTCAGAGAAGGCACAAAGAATGGCACCGCATTTTTCAGGTGCCATGGCCACGAGCAATTTGACTTGACTGGTTTGGACCCCGACTACAACAGGATGTTCAACGAGGGCATGGTCTGCACTGCCCGGATCGTGTCCAAGGCTGTTATTTCTGGGTACAAAGATGGATTCAACAAGATCCAATCCTTGGTGGATGTAGGTGGTGGTATTGGAGGATCACTTTCTGAGATTGTTCGAGCCTACCCACACATCGAAGGCATCAACTTTGATTTGCCCCATGTGGTTTCCACAGCACCCAAGTACGAGGGAATCACCCACGTCGGAGGAGACATGTTCGTGTCCATCCCTAAAGCCGATGCTATTTACATGAAGTGGATTTTGCATGACTGGAGCGACCAGCACTGCGTTCAGATATTGAAGAACTGTAGGAAGGCGATACCCGAGAGTGGAAAGGTGATTATTGTGGACCATATTTTGCAGCCAGAAGGGAATGAGGGGCTATTCGATGAGGTTGGGTATGCATTTGACATGATGCTGCTCGCTCATAATGCTGGTGGGAGGGAAAGGACGGAGCAAGACTGGAAGTGGCTATTTGAACACACTGGGTTCCCTCGTTACAATATCATCAAAATCAAAGCCCTCCCATCCATCATCGAGGCCTTCCCAATCTGA 1146 0.4904 MPHLFLYSCDLHEILVLIAFCFQGQHKDDRVEEDDELVGQAEIWRYMTSFTDSVALKCAVELRVADIIDQYGQPISLQKIVDNIADAPTPEISFLYRIMRVLVRRKIFSAQQSESGETLYGLTRASKWLLRDTKMTLSPMLLLENHPLHLNPTHYISECVREGTKNGTAFFRCHGHEQFDLTGLDPDYNRMFNEGMVCTARIVSKAVISGYKDGFNKIQSLVDVGGGIGGSLSEIVRAYPHIEGINFDLPHVVSTAPKYEGITHVGGDMFVSIPKADAIYMKWILHDWSDQHCVQILKNCRKAIPESGKVIIVDHILQPEGNEGLFDEVGYAFDMMLLAHNAGGRERTEQDWKWLFEHTGFPRYNIIKIKALPSIIEAFPI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0728 381 Pfam O-methyltransferase domain 155 361 IPR001077 GO:0008171
Dere08g0728 381 Pfam Dimerisation domain 55 103 IPR012967 GO:0046983
Dere08g0728 381 PIRSF O-mtase 23 381 IPR016461 GO:0008168
Dere08g0728 381 SUPERFAMILY "Winged helix" DNA-binding domain 37 132 IPR036390 -
Dere08g0728 381 CDD AdoMet_MTases 221 317 - -
Dere08g0728 381 PANTHER O-METHYLTRANSFERASE 43 363 IPR016461 GO:0008168
Dere08g0728 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 378 IPR029063 -
Dere08g0728 381 Gene3D Vaccinia Virus protein VP39 131 379 IPR029063 -
Dere08g0728 381 FunFam O-methyltransferase family protein 131 379 - -
Dere08g0728 381 Gene3D - 25 129 IPR036388 -
Dere08g0728 381 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 44 380 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0728 Dere-ChrDere08 11066114 11067357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0728 54 367 Monolignol Biosynthesis Gene Families AT5G54160 39.185 2.14e-78 244