Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0707 ATGATGGCGTCTGGATCGTCTGGTCGCGGTAACCCTGGCTCCAAAGGGTTCGATTTTGGTTCCGATGACATTCTCTGCTCATACGAGGACTATGGAAACCAGGATCCTTCTAATGGAAATCACATCGATCCCGCTGTCAGCACCAATTCTAGTAAGGATTTTCACAAATCAAGGATGGTAAGGGCGTCAATGATTCCTGCTACTGCCTATAATCCTCCTGAAGATTCTTTTAGCCAAGATGTGATGGCTACTGTGGACAAGAGCATGAAAAAATATACTGAAAATCTCATGCGGTTTCTTGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATATTGCTACAATCTTGACAAATCGATTGGAGAAATGCGATCTGATTTAAATCGTGACCATGGGGAGGCAGATTTCAAGTTAAAATCTCTTGAGAAACACCTCCAAGAAGTCCACAGATCTGTACAAATTTTAAGGGACAAGCAAGAGCTGGCTGACACTCAGAAAGAATTAGCCAAGCTTCAACTAGTTCAGAAAGAATCATCTTCCTCTAGCCATTCTCAGCACAATGAGGAGAGATCTTCGCCTTCTGCCACTGATCCGAAAAAAGCTGATAATGCATCTGACACGCATAACCAGCAGTTAGCTCTTGTCCTACCTCATCAGATTGCCCCTCAGCAGCAGCCAGCGCCACGTGTGACTCAAGCTACTCAACAACTTCCTTATTACATGCCCCCACCCCCGTTACCCAATCCACCAACTGTGAGCCAGATTCCTCAGAATCGGTATTTGCCTTCTGATCCACAGTATCAAGCACCCCAACCACAAGAGGTCTCCCGGGTGGCTCCACATCCAACACCATCTCAAGTAACTCAGAGCCCACCTGTTCAACAATATTCTCAGTATCAGCAGCCACAGCAGCAGCAATGGCCTCAGCAGTTACCTCACCAGGTACAGCCACCACAACAGTCTGCCATTCAACCTCAAATAAGGCCCCCAACAACTGGTTATTCTCCCTTCCCGCCAAGTCAAGCAACTAATCCATCTCCTGTGGAAACACTGCCTAACAGCATGCCAATGCAAGTGCCATATTCAGGGATTCCACCTCTTGGATCCAGCTGTGCTGATGCCATGCCTTATGGCTATGGCGGAACTGGTAGAGCAGTGTCACAGCAACCTCCAACCCCGCAAATGAAGGGCTCTTTTCCTGCACAACCTGGTGATGTTTACGGAGCAACTGGGACTTACTCCAAACTTCCTCCTGCTAGTTCATACTTGTTGTATGATGGTGAGGGAGGAAGACCAAATCATCCGCCCCAACCTCCTCATTTCGCTCAATCTCAATACCCTCCAACTAGTGCTTCCCTTCAGAATCCAACTGGTCATCATAATCTTATGGTCCGGAATCCTGGCCAAACACAATTCATTCGCAACCATCCATACAGTGAATTGATCGAGAAATTGGTGAGCATGGGATTCAGAGGAGATCATGTGGCGGGCGTGATCCAGAGGATGGAGGAGAGTGGACAACCTATTGATTTTAACTCAGTCATCGACCGTTTGAACGTGCATGGCTCTATGGGTCCCCAGAGAGGATGGTGA 1596 0.4743 MMASGSSGRGNPGSKGFDFGSDDILCSYEDYGNQDPSNGNHIDPAVSTNSSKDFHKSRMVRASMIPATAYNPPEDSFSQDVMATVDKSMKKYTENLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNRDHGEADFKLKSLEKHLQEVHRSVQILRDKQELADTQKELAKLQLVQKESSSSSHSQHNEERSSPSATDPKKADNASDTHNQQLALVLPHQIAPQQQPAPRVTQATQQLPYYMPPPPLPNPPTVSQIPQNRYLPSDPQYQAPQPQEVSRVAPHPTPSQVTQSPPVQQYSQYQQPQQQQWPQQLPHQVQPPQQSAIQPQIRPPTTGYSPFPPSQATNPSPVETLPNSMPMQVPYSGIPPLGSSCADAMPYGYGGTGRAVSQQPPTPQMKGSFPAQPGDVYGATGTYSKLPPASSYLLYDGEGGRPNHPPQPPHFAQSQYPPTSASLQNPTGHHNLMVRNPGQTQFIRNHPYSELIEKLVSMGFRGDHVAGVIQRMEESGQPIDFNSVIDRLNVHGSMGPQRGW 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0707 531 MobiDBLite consensus disorder prediction 28 51 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 421 453 - -
Dere08g0707 531 Coils Coil 139 175 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 238 355 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 383 404 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 174 190 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 31 51 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 332 346 - -
Dere08g0707 531 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
Dere08g0707 531 MobiDBLite consensus disorder prediction 174 206 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 254 331 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 191 205 - -
Dere08g0707 531 MobiDBLite consensus disorder prediction 239 253 - -
Dere08g0707 531 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 4 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0707 Dere-ChrDere08 10784838 10788640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0707 46 200 Trihelix Transcription Factor Family AT5G14540 32.051 2.62e-21 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0707 08 10784838 10788640 Dere08g0707 08 10784838 10788640 ECH