Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0704 ATGGAGCCTCTGCTGAAAGGCGAAAGCAGTGGCCAGAAGAAGCGGCCGCCGAGGTTGTTCCATCGCACGCATGCAATCACTCACGGCTCGCCCATCGAGAAAGCGGCTGCACTGGTGGATCTGGCTGAAGATGGTGTCGGCATCCCAGAGCAAATCCTTGATTCATCGAGATTTCAAAGTTCTGCTAGATTTTATTTTATATTTACTAAATTTAACCTTATATGGTCACTTGCTTATTTTGCCCTGCTAGTCCTGAATTTCCTTGAGAAACCCTTATGGTGTGAAAAGTATACTTCATATTCTTGCAAAGATAGAGAGTATTTCTTTCTCGGACAGTTGCCATATCTAACTGGTGCCGAATGTGTTATTTATGAGGGGATAACTCTTGTTGTGCTTATCATACATACATTTTTCCCTATATCATATGAAGGTTCCCGTATATATTGGAAAAATACTGTTAATCAATTGAAGGTCTTCTGTCTTTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCAGTGACTTATTACTCTTTACCTGTCAGATTTGCACCTTATATCAGGGTTGTTCTTTTCATTTTGAATATTAGGGAACTACGATCAAGCATCATCATCTTGGCTGGAATGCTTGACACATACGTGAATGTCTTGGCTTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTGGCCTATGTGATGTTTGAAGATACGCAGCAGGGGAAAATAGTATTTACTTCCTATGGAACCACATTATATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTCTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTGTTTTTTGTTCTCTTTGTGCTGTTGGGGGTTTACTTTGTTACAAACTTGGTCCTTGCCGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTTTGAGATGGACCGTATGAGAAGAAATATGTTGGAGAAAGCATTTGATCTGTTAGACAATGATCATGTTGAATATCTTAAGAAAGACCAATGCATTCAACTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAATATCTCCAGGGAAGAATTTGAATTGATATTTGATGAGCTGGACGATAGTCATGATGTGAAGATCAACAAGGATGAATTTGCCGATATTTGCAATGCCATTGCTTTAAAGTTCCAGAAGGAAAATACTCCATCCTACTTTGAGTATCTTTCATTCTACCATTCACCCATCTCTGAGAAGTTGAAATGCTTTGTGCGGAGCCCAAAGTTTGGATACCTAGTATCCTTCATTCTTTTACTGAATCTGGTTGCTGTTATTATTGAGACAACGCTTGATATAGAAAACAATTCTGCTCAAAAGGTGTGGCAAGAGGTTGAATTTGTATTTGGGTGGATATACGTAATAGAGATGGCTTTAAAAGTTTATTCATATGGATTTGAAAATTATTGGCGGGATGGTCAAAATCGCTTTGATTTTATGATCACATGGATAATTGTCATTGGAGAAACTATAACTTTTGTTACACCTGAGGGACAGGATTTTTTCTCGAATGGAGAATGGATTCGTTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCAGCGATACCGAGCATTTGTGGCAACCTTCCTAACTCTCATACCGAGTTTAATGCCATACCTTGGAACTATATTTTGTGTCTTATGTATTTATTGCTCACTTGGCGTGCAGATCTTTGGTGGAATTGTTAATATTGGAAACCCCAAATTGGAATCAACAGGTCTTGCTGACAATGACTATCTGCTCTTTAATTTTAATGATTATCCAAATGGAATGGTGACGCTTTTCAACTTGGTAGTGATGGGGAACTGGCAAATATGGATGCAGAGCTACAAGGAATTAACAGGGACTTCTTGGACCTATCTATACTTCATTAGCTTCTACTTAGTAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTCGTCTTGGAGGCATTTTTTGCTGAAATGGAGCTCGAGACATCAGATACTAGTGAAGAACATGACAAGGAAGTTGAAGGGGAGAAGTGTCGAAGACATGTTGGCACAAAAACACGTAGCCAAAGGGTTGATGTTCTTCTTCATCATATGTTGAGTGCTGAATTGGGTCAAGCACAACCTTCCGGTCCATAA 2199 0.3938 MEPLLKGESSGQKKRPPRLFHRTHAITHGSPIEKAAALVDLAEDGVGIPEQILDSSRFQSSARFYFIFTKFNLIWSLAYFALLVLNFLEKPLWCEKYTSYSCKDREYFFLGQLPYLTGAECVIYEGITLVVLIIHTFFPISYEGSRIYWKNTVNQLKVFCLLVLVADMVVYALYLSPVTYYSLPVRFAPYIRVVLFILNIRELRSSIIILAGMLDTYVNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVFEMDRMRRNMLEKAFDLLDNDHVEYLKKDQCIQLFEELNKYRTLPNISREEFELIFDELDDSHDVKINKDEFADICNAIALKFQKENTPSYFEYLSFYHSPISEKLKCFVRSPKFGYLVSFILLLNLVAVIIETTLDIENNSAQKVWQEVEFVFGWIYVIEMALKVYSYGFENYWRDGQNRFDFMITWIIVIGETITFVTPEGQDFFSNGEWIRYLLLARMLRLIRLLMHVQRYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNIGNPKLESTGLADNDYLLFNFNDYPNGMVTLFNLVVMGNWQIWMQSYKELTGTSWTYLYFISFYLVTVLLLLNLVVAFVLEAFFAEMELETSDTSEEHDKEVEGEKCRRHVGTKTRSQRVDVLLHHMLSAELGQAQPSGP 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0704 732 Gene3D - 202 308 - -
Dere08g0704 732 FunFam Two pore calcium channel protein 1 555 711 - -
Dere08g0704 732 Pfam Ion transport protein 124 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere08g0704 732 Pfam Ion transport protein 432 676 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere08g0704 732 Gene3D - 421 554 IPR027359 -
Dere08g0704 732 SUPERFAMILY EF-hand 309 396 IPR011992 -
Dere08g0704 732 Gene3D - 309 393 - -
Dere08g0704 732 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 3 728 IPR044581 GO:0005245
Dere08g0704 732 FunFam Two pore calcium channel protein 1 422 554 - -
Dere08g0704 732 Gene3D - 555 714 - -
Dere08g0704 732 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Dere08g0704 732 FunFam Two pore calcium channel protein 1 202 313 - -
Dere08g0704 732 SUPERFAMILY Voltage-gated potassium channels 429 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0704 Dere-ChrDere08 10759706 10774099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0704 1 730 Ion Channels AT4G03560 68.263 0.0 1058