Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0688 ATGGCTTCGGTTTCATCCTCTTCCATTTCCACTTGTGTGTTTGTTCTCCTTCTCCTGCACTCATCTTCCATCTTTAACAATCTTAGTGCAGCAAAACACAGTCTGACCGACCGTCATAACCGGCATCCCCATCACCACCGCCATACCCAGAATCCTCCATTAAACCCAAGGCTTTACCGAGCCTTTCTTGCGCTCCAAGCATGGAAGCGTGTGATCTACTCTGACCCACATAACTTCACTCACAATTGGGTAGGCCCTTCAGTCTGCAACTATACTGGTGTATATTGTTCTCCATCTCTAGATGATCCTAAAGTCACAGTTGTGGCTGGCATTGATCTCAATTTTGCAGACATAGCAGGGTTCTTACCCAATGAATTAGGCCTACTCTGTGATCTCGCTCTTCTCCATCTCAGTAATAATCGCTTTTGCGGCATCCTCCCAATGGCCTTAGGCAACCTTACTCTGCTCTATGAACTTGATATTAGCAGCAACAGATTTGTAGGGTCTTTTCCTTCTGTTGTGCTTTCCCTTCCCACCCTTAAATATCTTGATATTCGCTATAATGAGTTTGAAGGGCCATTGCCTCCTCAACTTTTCAACAAAACGTTTGATGCTATTTTTCTTAACAACAATCGATTTACCAATTCAATCCCAGCAACTTTAGGCCAAAGCTCAGCCTCTGTGATTGTGTTTGCTAATAACAAATTTGGAGGGTGTCTCCCTGAAAGCATAGTCAATTTTGCTGATACATTGGAAGAGCTGGTCTTAATTAACACCAGTTTGTCTGGTTGTTTGCCACAGCAAGTTGGATTTCTATATAAACTAAGAGTGTTGGATGTGAGCTTTAATAAAATTGTTGGTCCCATACCTTACAGCCTTGCTGGGTTGTCTCATTTGGAGCAGCTAAATTTGGGCCATAACAAGTTGAGTGGTGCAGTGCCGATGGGAGTTTGTGAGCTGCCCAACTTGGCAAACTTCACGTTTTCATATAATTTCTTCTGCGAGGAAGAGGGAATTTGTCAGAATCTGACATTGAAACGCATTGTGTTTGATGACCGTCGGAACTGCTTGCCGGAGAAGCCATTGCAGAGGAGCAAAGAGGAATGCAATGCTGTACTTGAGCACCCAGTTGATTGCTCTGAGCTTTGCTGTCCGGGAGGTATTACTTCTGGTTCAGTGGCTATCCCACCAGCTTCAATACCAGGAGGAATGCCTGTATCTTCACCCATTGCAGCACCAACCTATCCATGA 1251 0.4444 MASVSSSSISTCVFVLLLLHSSSIFNNLSAAKHSLTDRHNRHPHHHRHTQNPPLNPRLYRAFLALQAWKRVIYSDPHNFTHNWVGPSVCNYTGVYCSPSLDDPKVTVVAGIDLNFADIAGFLPNELGLLCDLALLHLSNNRFCGILPMALGNLTLLYELDISSNRFVGSFPSVVLSLPTLKYLDIRYNEFEGPLPPQLFNKTFDAIFLNNNRFTNSIPATLGQSSASVIVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNKIVGPIPYSLAGLSHLEQLNLGHNKLSGAVPMGVCELPNLANFTFSYNFFCEEEGICQNLTLKRIVFDDRRNCLPEKPLQRSKEECNAVLEHPVDCSELCCPGGITSGSVAIPPASIPGGMPVSSPIAAPTYP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0688 416 Gene3D Ribonuclease Inhibitor 232 367 IPR032675 -
Dere08g0688 416 FunFam Leucine-rich repeat extensin-like protein 1 62 223 - -
Dere08g0688 416 Pfam Leucine rich repeat 250 309 IPR001611 GO:0005515
Dere08g0688 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 17 390 - -
Dere08g0688 416 Gene3D Ribonuclease Inhibitor 62 231 IPR032675 -
Dere08g0688 416 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 241 336 - -
Dere08g0688 416 SUPERFAMILY L domain-like 62 339 - -
Dere08g0688 416 Pfam Leucine Rich repeat 177 191 IPR001611 GO:0005515
Dere08g0688 416 Pfam Leucine rich repeat N-terminal domain 63 97 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0688 Dere-ChrDere08 10428064 10429314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0688 55 409 Trihelix Transcription Factor Family AT2G15880 52.958 4.16e-137 407