Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0662 ATGATCAAGTTTTCCTTTACCATATGGCAACAGATAATATGCCCAGAACCATTGGTGACATCCAAGGTTAGGACATGTCAAAGTCACTCTCTCTCTATCCCTCTCCTTTCTCGTAAGAGCAAAGGAGGTTGGGAAGGTCACTCACTCACTCATGCAAAGGAATTAAAGCACTTAAAATGCAATGATTCTGAAAATACTCACAGCAATATTATCGTGGAGAGACGCAAAGACAGCTTAATTAGAACATGCCCTTCCTGTGGTCATCATATCAAATGCCAAGAACAGGCTGGGATCCATGACTTGCCTGGACTGCCTGCTGGAGTGAAGTTTGATCCAACTGATCAGGAGATTCTTGAACACTTGGAAGCCAAAGTTCGATCTGATATTCATAAGCTTCATCCATTGATTGATGAGTTCATCCCTACCCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCCGAAAAGTTACCAGGAGTAAGCAAAGATGGGCTGGTCCGCCATTTCTTTCACAGGCCATCCAAAGCATACACGACTGGGACAAGGAAAAGGAGGAAGGTGCACACTGATGACGTGGACGGCAGCGAGACACGTTGGCACAAAACAGGGAAGACCAGGCCAGTGTACATGAGTGGCAAGCTCATAGGGTACAAGAAGATTCTCGTGCTTTACACAAACTATGGCAAGCAAAGAAAGCCCGAGAAGACAAACTGGGTAATGCACCAGTACCACCTTGGGTACAACGAAGAGGAGAAGGAAGGAGAGTTAGTGGCGTCCAAGGTTTTCTATCAGACACAACCTAGGCAATGTGGTTCCTTGCACCTCAAAGACCCTGCAAAACTCAAGCCCCAATCCATGTACGAAGCTACGAATCATAAAAGCAATCAAGGGTTTGTTGAGTACTACAATTCTTCTTTCTTGTCCTTTGATCATGGCAGCCAACAGAGGTCTGGCAATTCTCAAGTGATTTCCCATTTTCCTGTCCAGGATGGTTCTTCGTTCATGCCTTGA 1011 0.454 MIKFSFTIWQQIICPEPLVTSKVRTCQSHSLSIPLLSRKSKGGWEGHSLTHAKELKHLKCNDSENTHSNIIVERRKDSLIRTCPSCGHHIKCQEQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDDVDGSETRWHKTGKTRPVYMSGKLIGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGYNEEEKEGELVASKVFYQTQPRQCGSLHLKDPAKLKPQSMYEATNHKSNQGFVEYYNSSFLSFDHGSQQRSGNSQVISHFPVQDGSSFMP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0662 336 SUPERFAMILY NAC domain 98 264 IPR036093 GO:0003677|GO:0006355
Dere08g0662 336 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 73 287 IPR044799 GO:0003700
Dere08g0662 336 MobiDBLite consensus disorder prediction 312 336 - -
Dere08g0662 336 FunFam NAC domain-containing protein 73 113 268 - -
Dere08g0662 336 Pfam No apical meristem (NAM) protein 105 245 IPR003441 GO:0003677|GO:0006355
Dere08g0662 336 Gene3D NAC domain 113 268 IPR036093 GO:0003677|GO:0006355
Dere08g0662 336 ProSiteProfiles NAC domain profile. 104 264 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0662 Dere-ChrDere08 10197506 10200140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0662 81 283 NAC Transcription Factor Family AT4G28500 81.373 3.96e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere08g0662 NAM 1.7e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0662 08 10197506 10200140 Dere08g0662 08 10197506 10200140 ECH