Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0653 ATGGAACTGCAGAGGGGAGATTATGAGAGTGATCAATTACTCCAAGCCCATTCACACATATGGAGTCACACTTACAGTTTCATAAACTCCATGTCACTCAAGTGTGCAATTCAACTGGGTATGCCAGATATCATTCATAAACATGGCCAACCTATGAAACTTTCCCAACTCATCTCGGAGCTATCAATTCACCCAACCAAATCCCATGGCGTTCATAGCCTCATGAGCATTTTGACCCATTCGGGCTTCTTTTGTAGACAGAATGCAAGTGAGGATGACCCCGATCCAGAAGAAGCCTACACGCTCACCGATAGTGGTAAGCTAATCGTTAAGGACAGCCCCTACAGTATGGCACCTTACTTGCTTCTGTCCGCTGATCCAATACAGATGAAGCCTTGGCATTATCTGAGTACTTGGTTCCATAATGACCTCCCTACGCCATATGAAACAGCACATGGGATGGCCATTTGGGAATATGCAAGTCGAGAGCCAAGGCTTAATCATCTGTTCAATGATGCTATGCTGAGTGATTCTAGTTTGATCTCCAAAGTAGTGATTGAGAAGTGCAAGTGGGCGTTTGAGGGGCTGGAGTCTCTGGTTGATGCTGGTGGGGGTACTGGAACTTTGGCAAAGGCCATTGCTGAGTCATTCCAACACTTGGAATGCACTGTGTTGGATCTTCCTCACGTGGTTGCTGACTTGCAGGGCACTAACAACTTGAAATTCGTTGCAGGTGACATATTTGAGGCCATTCCTCATGCAGATGCAATCCTATTGAAGAGCATACTGCATGACTGGGTCGACGAAGAATGCATTAAAATACTTAAGAAGTGCAGAGAGGCAATTACAGGTAATGGGAAGAGAGAAAACAAGGTGATCGTCATAGACATGGTAATAATGGAGAACCTGAAGGGAGAAGATGATGAATCGGTTGGAACACAGCTTTGCTCCAATATGTTGATGATGGTGCTGGCTAACGGAAAAGAACGAACTGAGAAAGAGTGGGCTAAGTTATTCTTTGCTGCTGGATTCAGGGACTATAAGATAAACCCTATCTTGGGTTTAAGATCTCTCATTGAAGTTTACCCGTAG 1092 0.4478 MELQRGDYESDQLLQAHSHIWSHTYSFINSMSLKCAIQLGMPDIIHKHGQPMKLSQLISELSIHPTKSHGVHSLMSILTHSGFFCRQNASEDDPDPEEAYTLTDSGKLIVKDSPYSMAPYLLLSADPIQMKPWHYLSTWFHNDLPTPYETAHGMAIWEYASREPRLNHLFNDAMLSDSSLISKVVIEKCKWAFEGLESLVDAGGGTGTLAKAIAESFQHLECTVLDLPHVVADLQGTNNLKFVAGDIFEAIPHADAILLKSILHDWVDEECIKILKKCREAITGNGKRENKVIVIDMVIMENLKGEDDESVGTQLCSNMLMMVLANGKERTEKEWAKLFFAAGFRDYKINPILGLRSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0653 363 PANTHER O-METHYLTRANSFERASE 14 348 IPR016461 GO:0008168
Dere08g0653 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Dere08g0653 363 Gene3D Vaccinia Virus protein VP39 110 363 IPR029063 -
Dere08g0653 363 CDD AdoMet_MTases 199 287 - -
Dere08g0653 363 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Dere08g0653 363 FunFam O-methyltransferase ZRP4 111 363 - -
Dere08g0653 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Dere08g0653 363 Pfam O-methyltransferase domain 133 345 IPR001077 GO:0008171
Dere08g0653 363 Gene3D - 4 109 IPR036388 -
Dere08g0653 363 PIRSF O-mtase 2 363 IPR016461 GO:0008168
Dere08g0653 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Dere08g0653 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 362 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0653 Dere-ChrDere08 10071457 10072746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0653 31 349 Monolignol Biosynthesis Gene Families AT5G54160 33.951 1.67e-52 176