Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0652 ATGGAAGAACGAGAAAAATCTATGGCGGCTGTCCGTGGGATCTGGAGGCCAAGCAAATACCCAGTACCGATAATGGATTTGCATAATGAAGTTGATACAAAGGGGTTACTCCAAGCCCACGCCCACGTATGGAACCAAACCTATAACTTCATCAATTCCATGTCCCTCAAGTGTGCAATTCAACTGGGTATACCAGATATCATCCATAATCATGGACAACCCGTCATGTCTCAGTCTCAACTGATAGCTGCGCTATCAATCAACCCAGCAAAAGCAGATGGCATCAGTCGCCTCATGTCCATTTTGACACATTCAGGTTTCTTTCATAAAAAGAAAGTTAGTGAAAATGACCCTGAGGAAGCCGATACAGTGACTAATGCTGGTCGGCTACTTGTCAAGGACAATCCCTTGAGTATGACCTCTTCTTTGCTTCTGTCCCTTGATCAAATTCAGACGGAACCTTGGCATCATTTGAGTACCTGGTTTCAGAATGACCATCCTACAGCATATCACACAGCACATGGAATAGCCATTTGGGAATATGCTGGCCATAACCCAAAGCTCAATCATCTATTCAACAATGCCATGTTATGTGATTCTCGTCTAGTTTCAAATGCATTGCTTGACAAGTTCAAGTGGGTGTTCGAGGGATTGGAGTCGCTGGTTGATGCTGGAGGAGGCACAAGGACTGTGGCAAAGGCCATAGCGCAATCCTTCCCACACATGAAATGCACTGTGCTATATCTCCCCCATGTGGTTGCGGACTTGCAAGGGACTAACAACTTAAACTATATTGGAGGTGACATGTTTGAGGCAATTCCTCAAGCAGATGCAGTTTTACTGAAGTGGATATTGCATGACTGGGATGATGACGAATGTGTGAGTATACTTAGGAAGTACAAAGAGGCAATTTCAGGTAACGGAAGGACAGGTAATAAGGTGATCGTCATAGACATGGTGGTGCAGCACCACAAGAAGGACCGTGAGTCGGTTGAAACACAACTCTGCTTCGATATGTTGATGATGGTCCAGTCTACGGGAAGGGAAAGAAATGTGCACGAATGGGCTAAGTTATTTTACACTGCAGGTTTCAATGACTACAAAATAACCCCAGTTTTGGGTCTAAGATCTATCATTGAAATTTATTGA 1149 0.4413 MEEREKSMAAVRGIWRPSKYPVPIMDLHNEVDTKGLLQAHAHVWNQTYNFINSMSLKCAIQLGIPDIIHNHGQPVMSQSQLIAALSINPAKADGISRLMSILTHSGFFHKKKVSENDPEEADTVTNAGRLLVKDNPLSMTSSLLLSLDQIQTEPWHHLSTWFQNDHPTAYHTAHGIAIWEYAGHNPKLNHLFNNAMLCDSRLVSNALLDKFKWVFEGLESLVDAGGGTRTVAKAIAQSFPHMKCTVLYLPHVVADLQGTNNLNYIGGDMFEAIPQADAVLLKWILHDWDDDECVSILRKYKEAISGNGRTGNKVIVIDMVVQHHKKDRESVETQLCFDMLMMVQSTGRERNVHEWAKLFYTAGFNDYKITPVLGLRSIIEIY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0652 382 PIRSF O-mtase 23 382 IPR016461 GO:0008168
Dere08g0652 382 Pfam Dimerisation domain 54 103 IPR012967 GO:0046983
Dere08g0652 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 381 IPR029063 -
Dere08g0652 382 SUPERFAMILY "Winged helix" DNA-binding domain 36 136 IPR036390 -
Dere08g0652 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 44 382 IPR016461 GO:0008168
Dere08g0652 382 Gene3D Vaccinia Virus protein VP39 132 382 IPR029063 -
Dere08g0652 382 FunFam O-methyltransferase ZRP4 133 382 - -
Dere08g0652 382 Pfam O-methyltransferase domain 155 365 IPR001077 GO:0008171
Dere08g0652 382 FunFam Coniferyl alcohol 9-O-methyltransferase 26 131 - -
Dere08g0652 382 Gene3D - 26 131 IPR036388 -
Dere08g0652 382 PANTHER O-METHYLTRANSFERASE 37 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0652 Dere-ChrDere08 9981181 9982947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0652 54 369 Monolignol Biosynthesis Gene Families AT5G54160 30.218 2.54e-47 163