Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0644 ATGGCACAATTGCCTCCCAAGATCCCAAACATGACACCCAATTGGCCTGACTTTTCTTCTCACCAAAAGATGCCTTCCCTTGCAAGTTTGTCACCAAATAATGTGACCACCAACAGTACCACCCATCAGAATCCTTCTTGGGTGGACGAATTCCTCGACTTCTCGTCGGTACGACGAGGGGCTCACCGGAGATCGATGAGTGATTCCATTGCCTTCATTGAGACGCCAATGCTGGACGATTGTCGCGGTAACTCAGGCATGGTTCCACCGAGGTCTGGGGGTGATAATGAGTTTGACAGATTTGATGATGAGCAATTCATGTCTATGTTCACTGACGATTTATCCGGGGCTCCCATGCCGCCCACCATGTCGTCCTCGAACCCTTCAAGCCCATCTGATCATAACAGCATTAATGATGAAAAAGAAACGGGCCAAAACCAGAACCAATCGGAGGAGAAGGAGAAGGAGCAGGAGCAGCAACAGAAGCAGCAGCAGAAGCGATTGAAGAATGAATCTGATGAGGTTGAGAGCCAACACGAACAGGAAACTCAAGCTCCAAACAGCACAAATACAACTTCCTCCGGTGACAGAATTACTGACCCTAAGAGAGTTAAAAGAATCCTGGCAAACAGACAATCTGCACAAAGGTCACGTGTGAGGAAGCTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTACAGGCTGAAGTTTCAGTGCTGTCTCCAAGGGTTGCTTTCTTAGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCGCTGAAGCAAAGAATCGCTGCCCTTGCCCAAGACAAGATCTTTAAAGATGCTCATCAAGAGGCTCTAAAGAGAGAGATAGAGAGACTGAGGCAAGTGTATCACCATCAGACCCTCAAGAAGATGGAAAATGCTGCAGGGCCACCATCACCATCCTCATCCCCATCACCAAAACCAGGATGTGATGCTAAGACAGAAAAGGAACAACTTCTCAATGTTTGA 1005 0.4706 MAQLPPKIPNMTPNWPDFSSHQKMPSLASLSPNNVTTNSTTHQNPSWVDEFLDFSSVRRGAHRRSMSDSIAFIETPMLDDCRGNSGMVPPRSGGDNEFDRFDDEQFMSMFTDDLSGAPMPPTMSSSNPSSPSDHNSINDEKETGQNQNQSEEKEKEQEQQQKQQQKRLKNESDEVESQHEQETQAPNSTNTTSSGDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQTLKKMENAAGPPSPSSSPSPKPGCDAKTEKEQLLNV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0644 334 CDD bZIP_plant_RF2 203 253 IPR044759 GO:0003700|GO:0006355
Dere08g0644 334 MobiDBLite consensus disorder prediction 81 100 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 297 334 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 13 44 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 118 134 - -
Dere08g0644 334 SMART brlzneu 198 262 IPR004827 GO:0003700|GO:0006355
Dere08g0644 334 FunFam Basic leucine zipper 61 201 274 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 1 44 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 181 197 - -
Dere08g0644 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 205 220 IPR004827 GO:0003700|GO:0006355
Dere08g0644 334 Gene3D - 201 274 - -
Dere08g0644 334 PANTHER BASIC LEUCINE ZIPPER 34 1 325 - -
Dere08g0644 334 SUPERFAMILY Leucine zipper domain 202 256 IPR046347 GO:0003700|GO:0006355
Dere08g0644 334 MobiDBLite consensus disorder prediction 135 180 - -
Dere08g0644 334 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 200 252 IPR004827 GO:0003700|GO:0006355
Dere08g0644 334 Pfam bZIP transcription factor 202 246 IPR004827 GO:0003700|GO:0006355
Dere08g0644 334 Coils Coil 141 185 - -
Dere08g0644 334 MobiDBLite consensus disorder prediction 111 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0644 Dere-ChrDere08 9921642 9924028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0644 1 279 bZIP Transcription Factor Family AT3G58120 59.596 2.57e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere08g0644 bZIP_2 4.2e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0644 08 9921642 9924028 Dere08g0644 08 9921642 9924028 ECH