Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0642 ATGGGCATGAAGAGCACAGGAGGAGAGATAGTTCAGGTCCAAGGAGGCCACATTGTTCGATCCACGGGTCGAAAAGATCGTCACAGTAAGGTTTACACTGCAAAAGGCCCTCGTGACCGCAGGGTTCGACTCTCAGCCCACACAGCCATTCAATTCTACGATGTTCAAGACCGTCTCGGCTATGACCGACCCAGCAAGGCCGTGGATTGGCTCATCAAGAAGGCTAAATCCGCCATTGACAAGCTCGCTGAGCTTCCTCCATGGCACCCAACTCCTAACACTACTACTACTGAAGAAGCCCCTGAAATGGAAATTGCAGAGGAAACAGAGTCCTCTGGTTACAATTTGCAGCTTCAGAGGCAGTTTGGTGAGAACCCAGATAATCATTCTGCTTTTATTCCATCGCAGATTGACACCGACGCCATCGCTTTCTTCCCCACCACCTCTGCGACTATGACTACCCCCATCAATTTTCAGAACTACCCACCTGATATAATCTCCAGAACCACCAACCCCAATGAAGATCTTGGACTTTCTCTTCATTCGTTTCAAGACCCAGGCCTGATTCATGGCCAATCATCACAAGGAGACCCGAATCCCGTTGGATTTGTGACTTGGAACAACGACGCGTCTATGTTGGTAGGGCAAGGTTCGACATTTTCACAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCTTGGAATGACATTGCGATAACTTGTTCTTCTTCGGAGCATCAGAACAAGTCCCAAGCTTCAATCTTTGGGAGTAGGTTTCTGTCTGATGGAATGGGAATTCCTGGGTTCTGCATTCCCGCCAGAATTCAAGTGTTCAATCCTTTTCTATCAGGCGTATATCTGCAATTATCTGCAATTCTCTCCCAATTTGCAACCCATTGA 897 0.4805 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWHPTPNTTTTEEAPEMEIAEETESSGYNLQLQRQFGENPDNHSAFIPSQIDTDAIAFFPTTSATMTTPINFQNYPPDIISRTTNPNEDLGLSLHSFQDPGLIHGQSSQGDPNPVGFVTWNNDASMLVGQGSTFSQRGTLQSSFSAWNDIAITCSSSEHQNKSQASIFGSRFLSDGMGIPGFCIPARIQVFNPFLSGVYLQLSAILSQFATH 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0642 298 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Dere08g0642 298 Pfam TCP family transcription factor 23 112 IPR017887 -
Dere08g0642 298 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 235 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0642 Dere-ChrDere08 9896137 9897340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0642 8 275 TCP Transcription Factor Family AT3G15030 40.000 1.30e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere08g0642 TCP 3.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0642 08 9896137 9897340 Dere08g0642 08 9896137 9897340 ECH