Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0638 ATGCGCCTGCTGGCTCACAATGGCATCTTTACTATCCTAGAAAACAACAATGAAGTAAGTGAAGTAACATGTGATATCACTCCTACATCACGCCTCCTTGTCAATGGCATTAATCCTTGTTTATCTTCAATGCTTCAGTGGGGTCTAGACATAGGATGGGTGGATATGTTGCAACACTTGGCGAAATGGGTTCATAGTGAGGATCTCACACTACCCCAGACCACAATTGGAGTAGGCTATTGGGACTTCCTTAGTCAAAACCCTCCATATATGACAGCATTCAATGAAGCAATGGCAAGTGATTCTCAAATCCCAGGCTGCGTACTGAGACACTTGGATTTTGTTTTTGAGGGCTTCAGTTCCATCGTTGATATTGATGGCGGAACTGGTATAGTTGCTAATATAATCTGTGCGGCTTTTCCTAACTTGAAATGCACAGTGTTGGACCTTCCTAAAGTTGTAGCAAACTTATCATCAGGAAACTCCAATCCGAGTTTTGTTGGTGGGGACAAGCTCAAATCCATCCCCCTTGCTGATGCAGTTTTGCTAAAGGTAAATATATGTACATACGAAGTTTGA 579 0.4249 MRLLAHNGIFTILENNNEVSEVTCDITPTSRLLVNGINPCLSSMLQWGLDIGWVDMLQHLAKWVHSEDLTLPQTTIGVGYWDFLSQNPPYMTAFNEAMASDSQIPGCVLRHLDFVFEGFSSIVDIDGGTGIVANIICAAFPNLKCTVLDLPKVVANLSSGNSNPSFVGGDKLKSIPLADAVLLKVNICTYEV 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0638 192 Gene3D Vaccinia Virus protein VP39 36 190 IPR029063 -
Dere08g0638 192 PANTHER O-METHYLTRANSFERASE 1 185 IPR016461 GO:0008168
Dere08g0638 192 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 184 IPR029063 -
Dere08g0638 192 Pfam O-methyltransferase domain 58 184 IPR001077 GO:0008171
Dere08g0638 192 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 192 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0638 Dere-ChrDere08 9839713 9840291 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0638 60 184 Monolignol Biosynthesis Gene Families AT5G54160 30.000 6.69e-14 67.0