Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0618 ATGGACTCCCTTGGGGGAGCTCCGCCGCCCGCCACCACTGCTCCGTCGCGGCCGTCGTCGTCGCCGTTCCCCGGACGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCTTGGGGCGAACGTCACCTCGAGCTCAATCGCGGAAACCTCCGTCAGAAGCACTGGCAAGAGGTTGCCGACGCCGTGAACGCCAATCACGGCCACGTCAAGAAGGCGCGCCGAACCGACGTCCAGTGCAAGAACCGCATCGACACCCTTAAGAAGAAGTACAAGATCGAGAAGAACAAGGTCATCGAATCTGACGGCAACTACACTAGCCCTTGGCCTTTCTTCGCCCGCCTCGACGCTCTCGTCGGCGATAGCTTTCCAGTCAAGAGACCCTCGTCGCCGGCCGACAGTGACCGCCGTAGCAGCCCTCCCACGAAGTCTCCGGCCTGGGTAATCTCGCACGTGCCGGTCGGGCCCCGATCCGGTACTCAGAAACGGCCGGCGGCGCCGTCGCCGGCGCCGGCGAGCATGGACGATTCTTTTTTTCGTCGCAATTTTTCGGCTTTTGCAGCAGCTGCGGCGGCAGCGGCCGAGGCAGAGGACGCAGACAGTGATGATTCGGGTGGGTCGAGGTCAAGCAGTGCCAGTGGAAGTAGAAAGAGAGGAAGAGAAAGAGAGAAAAAGAGGGCAAATGATAGGGATTCAGAATTTGGGTATAGGGAGTTGGCGCAAGCAATAGAGAGGTTCGGTGAGATATACGAGAGAGTAGAGGCGGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAATTTGCTAAGGATTTAGAGTACCAGAGGATGCAGCTTTTCATGGAAACGCAGGTTCAGCTGCAAAAAATCAAGCGCGCCAAGCGATCTTCACGGGCTGGTGAGACTTCTCCACTTTTATTTCATTTCGGAACTACTCCAAGTGATGATGAGTATGAATTGGTTGTGTCGTCCTTGGGTTGTGATGTGCTGAAAGGTTGTTTCAGGCATGCTGTGATTCAGATTGAAAAGTTTAACTTTCTGACATATGGTGATCTGGACACCAGCACGCTGGTGAAGACAGAAATTGATTCAGGTCTCTTCATTCTCTCCAACGAAGCTCGGGTGAGGCTCAGCTTGTTGAGAGGCGGATCAAGATGGATGAAGGGTCAGATCTTGTCGACGACCACCATGAGTGAGAGAGAGAGGGGAGATGGAGGAGAGGGAGAAGCTCTGGCAAAGCTGAGAGAGGTGGAGGAAGATGAGGAAAACTTTAGATCTGGTTTGACGACCACGAAGAGAGATAGAAAAGCTCTGATGAACAAAGAGAGAGGCCGAGGAAGATCCAGTCACCAGTGGAGAGAGGGACAAAGGAGAGACGAAGAAAAGAAAGAAAAAGAGGGAGCGACAGTAGAGAGAGAGAGAGAGGGAAGTCTGATCTGA 1458 0.5418 MDSLGGAPPPATTAPSRPSSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKNKVIESDGNYTSPWPFFARLDALVGDSFPVKRPSSPADSDRRSSPPTKSPAWVISHVPVGPRSGTQKRPAAPSPAPASMDDSFFRRNFSAFAAAAAAAAEAEDADSDDSGGSRSSSASGSRKRGREREKKRANDRDSEFGYRELAQAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKRAKRSSRAGETSPLLFHFGTTPSDDEYELVVSSLGCDVLKGCFRHAVIQIEKFNFLTYGDLDTSTLVKTEIDSGLFILSNEARVRLSLLRGGSRWMKGQILSTTTMSERERGDGGEGEALAKLREVEEDEENFRSGLTTTKRDRKALMNKERGRGRSSHQWREGQRRDEEKKEKEGATVEREREGSLI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0618 485 MobiDBLite consensus disorder prediction 1 26 - -
Dere08g0618 485 MobiDBLite consensus disorder prediction 127 176 - -
Dere08g0618 485 MobiDBLite consensus disorder prediction 217 234 - -
Dere08g0618 485 FunFam trihelix transcription factor ASIL2 30 96 - -
Dere08g0618 485 Pfam Myb/SANT-like DNA-binding domain 27 121 IPR044822 -
Dere08g0618 485 Coils Coil 253 273 - -
Dere08g0618 485 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 301 IPR044823 -
Dere08g0618 485 MobiDBLite consensus disorder prediction 199 234 - -
Dere08g0618 485 Gene3D - 30 96 - -
Dere08g0618 485 MobiDBLite consensus disorder prediction 425 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0618 Dere-ChrDere08 9405463 9410684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0618 181 309 Trihelix Transcription Factor Family AT3G14180 41.085 1.07e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere08g0618 Myb_DNA-bind_4 7.4e-25 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g0618 08 9405463 9410684 Dere08g0618 08 9405463 9410684 ECH