Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere08g0617 ATGGAGGAGACACGAGAAGATGCAGGGCCAGCAGAGCAAGGGCCCTCTAATGCTTCATGGTGGCCTTCAGATTTTGTTGAAAGATTTGGATCTGTTTCTTTGGCATCTCAAGATGTGACCTTAAACAATAAAGAATCACCTAGACATTCTGAGCAAGATGATTTGTCACCTCATAAAGCATCTCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATTCCAGAGAAAAGACTCAAGGAGCTTTTTCATAATATTCCTACTTTGGATGAGCTTCTTGCTTTGGGTGGTGAGGGTTTTAGGGCTGATATCATTCTCGTGGATGCAGAAAAGGATAAAAAGCTATCCATGTTGAAGCAACTAGTTGTGGCCCTAGTTAAAGGATTGAACTCAAACCCAGCTGCGATTATTAAGAAGATTGCTGGATTAGTTTCTGATTTTTACAAGCGGCCAAATGTGGAAAGTCCAGCAAAAGCTGCACTAGAGGAATCCTCCCAAATGTTTGAGAATCGAAGTGTTCAGTTGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCCCGAGCAATCTTATTTAAAGTTTTAGCAGATACTGTAGGTCTTGAAAGTAAACTAGTGGTGGGTTTGCCAAACGATGGGGTCGTTGAATGTGCAGATTCATACAAGCATTTGTCTGTCATAGTTGAATTAAATTCTGTGGAGCTACTGGTTGATCTCATGCGATTCCCGGGCCAATTATATCCGCAATCAACCAAGGCAATTTTTATGACGCATATTTCTGCAGCTGGAGAAAGTGATTCTGCAGAAAACGATTCCTGTGATTCACCGCTGGAACCTAACAGTCCTTTATATGGGGTTTCAGAGAGAATAGATCTTGACAGTGCTGAAAGAGAGGAAAATCTCCAATTCCATAGAAGACATGAAGCATCTTCGAATTTATCAGGCCTTTCTTTGCGAAATACAATGTTACGATCAAATAACGTTCTGGATAACAAATTAAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGGGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCCGATGACGGGGCTACATCAAGTTATAGGTCAGATGGTGCGCCCTCATCAGAAGCTCGCAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGATGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTGAAGCAGAATCGTCTTTTGAGAGAGCAGGGGGATGATAGATCTTTCTCGCATTCTCCAATTGATAGAAGTGGTGGTGGTGATCTTCAGAAAAATGTGTCAAATTTCCACGTTGGCCATGATGAAAGGTCATCTTTGAATTCTCTTAAGCATGACCAAGTAACTTCGCAAAAGGCAATGTCATTGCCCTCTTCACCGCATGAATATAGGGATGAAGCATCTGGGAGAAGTGGGCCATCAGGATATGGAGTGAATAATGAACTGCAATCGACGTGGAATAAAGTCCTTGAATCTCCAATGTTCAATAGTAAACCTCTATTACCCTATGAAGAATGGAATATTGATTTCTCAGAATTAACTGTTGGAACTCGGGTTGGGATTGGGTTCTTTGGAGAAGTCTTCCGAGGCATATGGAATGGGACAGATGTTGCAATAAAGGTTTTTCTGGAGCAAGATTTGACTACTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCCCGCTTGTCAATGGTTACTGAGTATATGGAGATGGGATCATTGTATTATTTGATCCATTTGAGTGGACAAAAGAATAAGCTTAGCTGGCGGAGACGACTAAAGATGTTACGGGATATATGCAGGGGGTTGATGTGCATACATCGTATGAAAATAGTTCACTGTGACCTGAAAAGTGCAAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAAATTCTACCATGAAAGATTCTTCATCAGCTGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGAAATGAACCATTCACTGAAAAGTGTGATATCTTTAGCCTGGGAGTGATTATGTGGGAGCTCTGCACCCTAAATAGGCCATGGGAAGGCATACCACCGGAGAGGGTGGTTTATGCCGTTGCTAATGAGGGATCCAGATTGGAGATTCCTGAGGGACCGCTAGGCAGGCTGATTTCAGATTGTTGGGCAGAACAACATGAGCGGCCAAGTTGTGAGCAGATCCTTTCCCGTTTGCTTGACTGCGAGTACTCATTGTGCTAA 2454 0.4279 MEETREDAGPAEQGPSNASWWPSDFVERFGSVSLASQDVTLNNKESPRHSEQDDLSPHKASQILWRTGMLSEPIPNGFYSVIPEKRLKELFHNIPTLDELLALGGEGFRADIILVDAEKDKKLSMLKQLVVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAALEESSQMFENRSVQLLGQIRHGSCRPRAILFKVLADTVGLESKLVVGLPNDGVVECADSYKHLSVIVELNSVELLVDLMRFPGQLYPQSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERIDLDSAEREENLQFHRRHEASSNLSGLSLRNTMLRSNNVLDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARGRSMLSGDRKTFRDFADDGATSSYRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQGDDRSFSHSPIDRSGGGDLQKNVSNFHVGHDERSSLNSLKHDQVTSQKAMSLPSSPHEYRDEASGRSGPSGYGVNNELQSTWNKVLESPMFNSKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKNKLSWRRRLKMLRDICRGLMCIHRMKIVHCDLKSANCLVNKHWTVKICDFGLSRIMTNSTMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGIPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEQHERPSCEQILSRLLDCEYSLC 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere08g0617 817 MobiDBLite consensus disorder prediction 37 58 - -
Dere08g0617 817 MobiDBLite consensus disorder prediction 491 505 - -
Dere08g0617 817 FunFam Serine/threonine-protein kinase isoform 1 551 639 - -
Dere08g0617 817 Pfam Ethylene-responsive protein kinase Le-CTR1 59 253 - -
Dere08g0617 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Dere08g0617 817 SMART serkin_6 561 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0617 817 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524
Dere08g0617 817 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 337 809 - -
Dere08g0617 817 MobiDBLite consensus disorder prediction 447 461 - -
Dere08g0617 817 MobiDBLite consensus disorder prediction 1 21 - -
Dere08g0617 817 MobiDBLite consensus disorder prediction 447 526 - -
Dere08g0617 817 MobiDBLite consensus disorder prediction 361 418 - -
Dere08g0617 817 Pfam Protein tyrosine and serine/threonine kinase 562 809 IPR001245 GO:0004672|GO:0006468
Dere08g0617 817 Gene3D Transferase(Phosphotransferase) domain 1 640 815 - -
Dere08g0617 817 ProSiteProfiles Protein kinase domain profile. 561 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere08g0617 817 CDD STKc_MAP3K-like 567 809 - -
Dere08g0617 817 SUPERFAMILY Protein kinase-like (PK-like) 534 809 IPR011009 -
Dere08g0617 817 Gene3D Phosphorylase Kinase; domain 1 554 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere08g0617 Dere-ChrDere08 9391309 9402888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere08g0617 1 817 MAP Kinase Kinase Kinase AT3G58640 72.161 0.0 1207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Dere08g0617 PK_Tyr_Ser-Thr 2e-60 CL0016